HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:11.9 nTPM
HPA Brain:9.0 nTPM
GTEx:11.9 nTPM
FANTOM5:10.3 Scaled Tags Per Million
Pig:13.8 nTPM
Mouse:14.7 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043979
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.0
Sample id Sample description nTPM
Hippocampus
nTPM: 8.9
1898 Male, age 80, left hemisphere 10.8
2529 Female, age 94, left hemisphere 9.8
2148 Female, age 91, left hemisphere 9.5
1911 Female, age 85, right hemisphere 8.1
2621 Female, age 67, right hemisphere 7.9
1855 Male, age 76, left hemisphere 7.3
Dentate gyrus
nTPM: 8.4
2528 Male, age 74, both hemispheres 10.4
2010 Male, age 76, both hemispheres 9.7
2530 Female, age 94, left hemisphere 8.6
1927 Female, age 91, both hemispheres 7.3
2531 Female, age 67, both hemispheres 7.3
2246 Female, age 85, both hemispheres 7.2
Entorhinal gyrus
nTPM: 8.8
2764 Male, age 80, right hemisphere 9.9
2117 Female, age 91, right hemisphere 9.5
1938 Female, age 85, left hemisphere 8.7
1787 Male, age 76, left hemisphere 8.5
2686 Male, age 75, right hemisphere 8.3
2613 Female, age 94, left hemisphere 7.7
Hippocampus, CA1
nTPM: 8.4
1873 Female, age 85, both hemispheres 10.5
2082 Female, age 91, right hemisphere 8.7
2527 Male, age 74, both hemispheres 8.1
2749 Male, age 80, left hemisphere 8.1
2045 Male, age 76, both hemispheres 6.8
Hippocampus, CA2
nTPM: 8.6
1963 Male, age 80, left hemisphere 10.5
1892 Male, age 76, both hemispheres 9.5
2249 Male, age 74, both hemispheres 8.9
2437 Female, age 94, left hemisphere 7.7
2113 Female, age 91, right hemisphere 7.6
1940 Female, age 85, left hemisphere 7.3
Hippocampus, CA3
nTPM: 8.5
2861 Female, age 67, both hemispheres 10.2
2620 Female, age 94, left hemisphere 9.9
1867 Male, age 76, both hemispheres 8.5
2436 Male, age 74, both hemispheres 8.2
2137 Male, age 80, left hemisphere 7.4
1891 Female, age 85, both hemispheres 6.7
Parahippocampal cortex
nTPM: 8.3
2622 Female, age 67, right hemisphere 11.3
2692 Male, age 74, both hemispheres 10.8
1990 Female, age 91, right hemisphere 9.0
2532 Female, age 72, left hemisphere 8.7
2250 Female, age 67, right hemisphere 8.3
1933 Female, age 85, both hemispheres 8.2
1850 Male, age 80, both hemispheres 7.2
2018 Male, age 76, both hemispheres 6.8
2693 Female, age 94, both hemispheres 6.5
2245 Female, age 91, both hemispheres 6.4
Perirhinal gyrus
nTPM: 7.3
1794 Male, age 80, right hemisphere 8.6
1847 Female, age 91, left hemisphere 7.6
2848 Male, age 76, right hemisphere 7.5
1841 Female, age 85, right hemisphere 6.8
2521 Female, age 94, right hemisphere 6.0
Subiculum
nTPM: 9.0
2438 Female, age 94, left hemisphere 13.5
2619 Male, age 74, both hemispheres 10.4
2729 Female, age 91, right hemisphere 9.5
1977 Female, age 85, both hemispheres 7.2
2042 Male, age 76, both hemispheres 7.0
1901 Male, age 80, both hemispheres 6.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.9
Samples: 197

Max nTPM: 23.5
Min nTPM: 3.2
Std nTPM: 3.1
Median nTPM: 11.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 23.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 22.0
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 20.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 19.6
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 19.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 19.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 18.9
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 18.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 18.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 17.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 17.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.3
FF:10169-103B7 60 years, female 12.4
FF:10153-102I9 76 years, female 8.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.8
Pig sample Sample description nTPM
Subiculum
nTPM: 12.1
Samples: 4

Max nTPM: 13.5
Min nTPM: 11.2
Sample A Female 11.2
Sample B Female 11.9
Sample C Male 13.5
Sample D Male 11.7
Dorsal hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 13.7
Min nTPM: 12.2
Sample A Female 12.2
Sample B Female 12.8
Sample C Male 12.4
Sample D Male 13.7
Entorhinal cortex
nTPM: 11.7
Samples: 4

Max nTPM: 13.8
Min nTPM: 10.7
Sample A Female 10.7
Sample B Female 10.8
Sample C Male 13.8
Sample D Male 11.4
Ventral hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 18.6
Min nTPM: 11.9
Sample A Female 11.9
Sample B Female 12.0
Sample C Male 18.6
Sample D Male 12.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.9
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.6
Sample A Male 12.9
Sample B Male 13.6
Sample C Female 12.6
Sample D Female 16.4
Hippocampal formation
nTPM: 14.7
Samples: 4

Max nTPM: 17.0
Min nTPM: 11.6
Sample A Male 16.7
Sample B Male 11.6
Sample C Female 13.4
Sample D Female 17.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69443475 Antisense, RP_050414_04_B07, Mouse strain C57BL/6J (56 days, male) 0.6

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