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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
622.4
nTPM
FANTOM5:
83.1
Scaled Tags Per Million
Pig:
296.9
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
622.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 571.3
2090
Male, age 80, both hemispheres
676.5
2188
Female, age 91, both hemispheres
572.1
1984
Male, age 76, both hemispheres
526.9
2301
Female, age 85, both hemispheres
509.5
Dorsal cochlear nucleus nTPM: 622.4
2802
Male, age 74, right hemisphere
741.2
2378
Male, age 80, both hemispheres
629.2
2187
Female, age 91, both hemispheres
609.8
2058
Male, age 76, both hemispheres
579.9
2370
Male, age 61, both hemispheres
551.6
Dorsal tegmental nucleus nTPM: 575.4
2083
Male, age 80, both hemispheres
638.3
2326
Male, age 74, both hemispheres
636.6
2358
Male, age 61, both hemispheres
513.8
1936
Male, age 76, left hemisphere
513.0
Dorsolateral tegmental area nTPM: 566.8
2337
Male, age 61, both hemispheres
645.1
2654
Male, age 80, both hemispheres
628.9
2360
Male, age 74, both hemispheres
523.0
2751
Female, age 85, both hemispheres
522.8
2141
Male, age 76, both hemispheres
513.9
Kolliker-Fuse nucleus nTPM: 538.1
2315
Male, age 76, right hemisphere
603.5
2163
Male, age 80, both hemispheres
510.0
2793
Female, age 91, left hemisphere
500.9
Lateral lemniscal nuclei nTPM: 475.0
2746
Female, age 85, left hemisphere
541.7
2169
Male, age 76, both hemispheres
523.9
2453
Male, age 74, right hemisphere
497.8
2320
Female, age 91, left hemisphere
456.8
2036
Male, age 80, both hemispheres
354.7
Lateral parabrachial nucleus nTPM: 564.1
2013
Male, age 80, both hemispheres
602.1
2139
Female, age 85, right hemisphere
595.7
2792
Male, age 76, both hemispheres
595.4
2790
Male, age 61, both hemispheres
463.2
Lateral vestibular nucleus nTPM: 551.8
2311
Male, age 80, both hemispheres
619.6
2184
Male, age 76, both hemispheres
483.9
Locus coeruleus nTPM: 475.5
2123
Female, age 91, both hemispheres
524.1
2162
Male, age 80, both hemispheres
512.8
2317
Female, age 72, unknown
491.5
2720
Male, age 74, both hemispheres
475.4
2014
Male, age 55, unknown
456.0
1980
Male, age 76, both hemispheres
453.2
2788
Male, age 74, unknown
415.9
Medial parabrachial nucleus nTPM: 535.6
2170
Female, age 91, both hemispheres
630.5
2463
Female, age 85, right hemisphere
572.5
2854
Male, age 80, both hemispheres
510.4
2786
Male, age 76, both hemispheres
484.7
2156
Male, age 61, both hemispheres
479.9
Medial periolivary nuclei nTPM: 540.8
2063
Male, age 76, both hemispheres
671.2
2081
Male, age 80, both hemispheres
602.1
2171
Female, age 85, both hemispheres
500.0
2458
Female, age 91, both hemispheres
480.6
2791
Male, age 74, right hemisphere
450.0
Motor facial nucleus nTPM: 533.8
2062
Male, age 76, both hemispheres
673.7
2126
Male, age 61, both hemispheres
630.4
2795
Female, age 91, both hemispheres
539.3
2365
Male, age 74, right hemisphere
483.5
2697
Female, age 85, both hemispheres
459.3
2327
Male, age 80, both hemispheres
416.5
Motor trigeminal nucleus nTPM: 523.2
2335
Male, age 61, both hemispheres
530.4
2079
Male, age 80, both hemispheres
528.0
2321
Female, age 91, both hemispheres
523.5
2560
Male, age 74, both hemispheres
523.0
2309
Male, age 76, both hemispheres
511.2
Nuclei of the trapezoid body nTPM: 579.3
1983
Male, age 76, both hemispheres
790.2
2159
Male, age 61, both hemispheres
556.3
2735
Female, age 85, both hemispheres
549.7
2166
Male, age 80, both hemispheres
516.5
2368
Female, age 91, both hemispheres
483.8
Nucleus raphe magnus nTPM: 510.6
2051
Male, age 76, both hemispheres
547.0
2160
Male, age 61, both hemispheres
530.7
2172
Female, age 85, both hemispheres
516.7
2459
Female, age 91, both hemispheres
504.6
2455
Male, age 74, both hemispheres
500.4
2328
Male, age 80, both hemispheres
464.4
Paramedian reticular nucleus nTPM: 493.9
2057
Male, age 80, both hemispheres
549.0
2313
Male, age 61, both hemispheres
498.0
2050
Female, age 85, both hemispheres
475.4
2052
Male, age 76, both hemispheres
453.1
Pedunculopontine tegmental nucleus nTPM: 513.4
2338
Male, age 61, both hemispheres
562.5
2334
Male, age 80, both hemispheres
524.3
1921
Female, age 85, both hemispheres
453.2
Pontine nuclei nTPM: 563.5
2787
Female, age 85, both hemispheres
627.2
1968
Male, age 76, left hemisphere
624.7
2115
Male, age 80, left hemisphere
596.3
1863
Male, age 55, unknown
567.0
2727
Male, age 61, right hemisphere
553.1
2109
Female, age 72, unknown
552.8
2319
Female, age 91, both hemispheres
524.7
2454
Male, age 74, left hemisphere
462.0
Pontine raphe nucleus nTPM: 512.5
2122
Female, age 85, midline
550.1
2853
Male, age 76, midline
474.9
Posteroventral cochlear nucleus nTPM: 598.4
2135
Female, age 91, both hemispheres
642.6
2341
Male, age 80, both hemispheres
637.5
2371
Male, age 61, both hemispheres
634.4
2752
Female, age 85, both hemispheres
567.8
2070
Male, age 76, both hemispheres
509.9
Principal sensory trigeminal nucleus nTPM: 498.1
2158
Male, age 61, both hemispheres
556.7
2008
Male, age 80, left hemisphere
485.2
2367
Female, age 91, left hemisphere
477.0
2324
Male, age 76, both hemispheres
473.6
Reticular pontine nucleus, caudal nTPM: 538.0
2092
Male, age 76, both hemispheres
597.6
2559
Male, age 74, both hemispheres
589.1
2457
Female, age 91, both hemispheres
533.8
2332
Male, age 80, right hemisphere
431.6
Reticular pontine nucleus, oral nTPM: 503.6
2361
Male, age 74, both hemispheres
523.1
2167
Male, age 76, both hemispheres
511.0
1939
Male, age 80, both hemispheres
509.2
2366
Female, age 91, both hemispheres
501.1
2012
Female, age 85, both hemispheres
473.7
Reticulotegmental nucleus nTPM: 542.2
2452
Male, age 74, both hemispheres
639.9
2322
Female, age 91, both hemispheres
519.8
2333
Male, age 80, both hemispheres
518.1
2325
Male, age 76, both hemispheres
490.9
Spinal trigeminal nucleus, oral nTPM: 490.9
2164
Male, age 80, both hemispheres
517.9
1978
Male, age 76, both hemispheres
510.7
2737
Female, age 85, both hemispheres
444.2
Subcoeruleus area nTPM: 528.5
2451
Male, age 74, both hemispheres
658.9
2369
Female, age 85, left hemisphere
525.6
2089
Male, age 76, left hemisphere
521.6
1958
Male, age 80, both hemispheres
489.4
2323
Female, age 91, left hemisphere
446.8
Superior olive nTPM: 504.2
2020
Male, age 76, both hemispheres
586.2
2561
Female, age 91, both hemispheres
506.9
2364
Male, age 74, right hemisphere
484.8
1875
Female, age 85, both hemispheres
480.5
2329
Male, age 80, right hemisphere
462.6
Ventral periolivary nuclei nTPM: 511.0
2023
Male, age 76, both hemispheres
566.9
2165
Male, age 80, both hemispheres
518.3
2794
Female, age 91, left hemisphere
485.1
2130
Female, age 85, both hemispheres
473.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 500.3
2161
Male, age 80, both hemispheres
541.1
1959
Male, age 76, both hemispheres
524.1
2456
Female, age 91, both hemispheres
500.0
2359
Male, age 61, both hemispheres
498.9
2449
Male, age 74, both hemispheres
469.5
2840
Female, age 85, both hemispheres
468.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
