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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.1
nTPM
Monaco:
23.9
nTPM
Schmiedel:
10.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.1
HPA sample
nTPM
gdT-cell nTPM: 46.2
Samples: 6
Max nTPM: 55.8
Min nTPM: 33.3
P10809_1007
33.3
P10809_1022
55.8
P10809_1041
48.9
P10809_1060
44.5
P10809_1077
45.1
P10809_1098
49.8
MAIT T-cell nTPM: 47.3
Samples: 6
Max nTPM: 72.8
Min nTPM: 31.4
P10809_1006
32.2
P10809_1024
69.0
P10809_1043
36.8
P10809_1062
41.8
P10809_1083
31.4
P10809_1097
72.8
Memory CD4 T-cell nTPM: 47.9
Samples: 6
Max nTPM: 56.0
Min nTPM: 34.0
P10809_1014
34.0
P10809_1026
52.2
P10809_1045
48.0
P10809_1064
49.1
P10809_1086
48.0
P10809_1113
56.0
Memory CD8 T-cell nTPM: 48.6
Samples: 5
Max nTPM: 60.8
Min nTPM: 33.1
P10809_1012
33.1
P10809_1027
60.8
P10809_1046
47.3
P10809_1065
57.8
P10809_1111
43.9
Naive CD4 T-cell nTPM: 42.0
Samples: 6
Max nTPM: 76.7
Min nTPM: 25.4
P10809_1015
25.4
P10809_1030
44.0
P10809_1049
76.7
P10809_1068
33.2
P10809_1085
33.9
P10809_1112
38.9
Naive CD8 T-cell nTPM: 49.3
Samples: 6
Max nTPM: 65.3
Min nTPM: 30.7
P10809_1016
30.7
P10809_1031
65.3
P10809_1050
48.5
P10809_1069
62.8
P10809_1087
46.8
P10809_1110
41.4
T-reg nTPM: 61.1
Samples: 6
Max nTPM: 108.2
Min nTPM: 44.5
P10809_1018
52.4
P10809_1037
44.5
P10809_1056
108.2
P10809_1075
58.1
P10809_1094
54.1
P10809_1106
49.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 15.5
Samples: 4
Max nTPM: 16.7
Min nTPM: 14.0
RHH5202_R3573
15.1
RHH5230_R3602
16.7
RHH5259_R3631
14.0
RHH5288_R3660
16.0
Effector memory CD8 T-cell nTPM: 14.2
Samples: 4
Max nTPM: 17.0
Min nTPM: 12.1
RHH5203_R3574
13.7
RHH5231_R3603
17.0
RHH5260_R3632
12.1
RHH5289_R3661
13.9
MAIT T-cell nTPM: 14.6
Samples: 4
Max nTPM: 19.8
Min nTPM: 11.8
RHH5233_R3605
13.3
RHH5205_R3576
13.3
RHH5262_R3634
11.8
RHH5297_R3663
19.8
Memory CD4 T-cell TFH nTPM: 20.7
Samples: 4
Max nTPM: 36.9
Min nTPM: 12.3
RHH5300_R3666
19.3
RHH5236_R3608
36.9
RHH5265_R3637
12.3
RHH5208_R3579
14.3
Memory CD4 T-cell Th1 nTPM: 19.0
Samples: 4
Max nTPM: 32.7
Min nTPM: 9.6
RHH5210_R3581
19.5
RHH5302_R3668
32.7
RHH5238_R3610
9.6
RHH5267_R3639
14.0
Memory CD4 T-cell Th1/Th17 nTPM: 22.4
Samples: 4
Max nTPM: 33.8
Min nTPM: 12.5
RHH5303_R3669
33.8
RHH5211_R3582
30.3
RHH5239_R3611
12.8
RHH5268_R3640
12.5
Memory CD4 T-cell Th17 nTPM: 14.5
Samples: 4
Max nTPM: 22.6
Min nTPM: 11.2
RHH5304_R3670
12.3
RHH5212_R3583
22.6
RHH5240_R3612
11.7
RHH5269_R3641
11.2
Memory CD4 T-cell Th2 nTPM: 15.5
Samples: 4
Max nTPM: 18.5
Min nTPM: 13.1
RHH5305_R3671
16.0
RHH5213_R3584
14.4
RHH5241_R3613
18.5
RHH5270_R3642
13.1
Naive CD4 T-cell nTPM: 15.6
Samples: 4
Max nTPM: 22.9
Min nTPM: 11.9
RHH5306_R3672
13.7
RHH5214_R3585
22.9
RHH5242_R3614
13.7
RHH5271_R3643
11.9
Naive CD8 T-cell nTPM: 13.6
Samples: 4
Max nTPM: 16.7
Min nTPM: 8.8
RHH5201_R3572
16.7
RHH5229_R3601
8.8
RHH5258_R3630
16.0
RHH5287_R3659
12.7
Non-Vd2 gdTCR nTPM: 19.3
Samples: 4
Max nTPM: 24.2
Min nTPM: 15.3
RHH5235_R3607
15.4
RHH5264_R3636
22.2
RHH5207_R3578
15.3
RHH5299_R3665
24.2
T-reg nTPM: 24.0
Samples: 4
Max nTPM: 31.2
Min nTPM: 15.8
RHH5301_R3667
31.2
RHH5237_R3609
31.0
RHH5266_R3638
17.9
RHH5209_R3580
15.8
Terminal effector memory CD4 T-cell nTPM: 13.1
Samples: 2
Max nTPM: 16.6
Min nTPM: 9.6
RHH5243_R3615
9.6
RHH5272_R3644
16.6
Terminal effector memory CD8 T-cell nTPM: 23.5
Samples: 4
Max nTPM: 48.4
Min nTPM: 12.9
RHH5232_R3604
12.9
RHH5204_R3575
48.4
RHH5261_R3633
16.5
RHH5296_R3662
16.0
Vd2 gdTCR nTPM: 20.2
Samples: 4
Max nTPM: 32.1
Min nTPM: 9.6
RHH5234_R3606
9.6
RHH5206_R3577
32.1
RHH5263_R3635
11.8
RHH5298_R3664
27.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
