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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
32.2
nTPM
Monaco:
93.5
nTPM
Schmiedel:
81.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.2
HPA sample
nTPM
gdT-cell nTPM: 32.2
Samples: 6
Max nTPM: 55.3
Min nTPM: 20.3
P10809_1007
20.3
P10809_1022
35.0
P10809_1041
55.3
P10809_1060
32.2
P10809_1077
25.6
P10809_1098
24.8
MAIT T-cell nTPM: 28.4
Samples: 6
Max nTPM: 32.1
Min nTPM: 21.7
P10809_1006
28.1
P10809_1024
32.1
P10809_1043
30.9
P10809_1062
26.7
P10809_1083
21.7
P10809_1097
31.1
Memory CD4 T-cell nTPM: 23.7
Samples: 6
Max nTPM: 32.8
Min nTPM: 18.1
P10809_1014
23.0
P10809_1026
20.6
P10809_1045
32.8
P10809_1064
18.1
P10809_1086
22.8
P10809_1113
24.9
Memory CD8 T-cell nTPM: 26.9
Samples: 5
Max nTPM: 30.5
Min nTPM: 21.2
P10809_1012
26.4
P10809_1027
29.3
P10809_1046
30.5
P10809_1065
21.2
P10809_1111
27.0
Naive CD4 T-cell nTPM: 24.2
Samples: 6
Max nTPM: 31.9
Min nTPM: 17.5
P10809_1015
17.5
P10809_1030
21.4
P10809_1049
31.9
P10809_1068
26.7
P10809_1085
21.1
P10809_1112
26.5
Naive CD8 T-cell nTPM: 24.7
Samples: 6
Max nTPM: 31.2
Min nTPM: 17.9
P10809_1016
17.9
P10809_1031
23.2
P10809_1050
31.2
P10809_1069
30.5
P10809_1087
20.6
P10809_1110
24.5
T-reg nTPM: 30.4
Samples: 6
Max nTPM: 35.7
Min nTPM: 23.6
P10809_1018
32.3
P10809_1037
29.6
P10809_1056
35.7
P10809_1075
23.6
P10809_1094
32.7
P10809_1106
28.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 76.1
Samples: 4
Max nTPM: 89.0
Min nTPM: 57.9
RHH5202_R3573
86.1
RHH5230_R3602
71.5
RHH5259_R3631
89.0
RHH5288_R3660
57.9
Effector memory CD8 T-cell nTPM: 93.5
Samples: 4
Max nTPM: 105.7
Min nTPM: 86.8
RHH5203_R3574
87.3
RHH5231_R3603
86.8
RHH5260_R3632
94.2
RHH5289_R3661
105.7
MAIT T-cell nTPM: 80.9
Samples: 4
Max nTPM: 121.5
Min nTPM: 54.8
RHH5233_R3605
54.8
RHH5205_R3576
121.5
RHH5262_R3634
74.7
RHH5297_R3663
72.4
Memory CD4 T-cell TFH nTPM: 81.2
Samples: 4
Max nTPM: 95.1
Min nTPM: 63.0
RHH5300_R3666
63.0
RHH5236_R3608
79.0
RHH5265_R3637
95.1
RHH5208_R3579
87.5
Memory CD4 T-cell Th1 nTPM: 78.7
Samples: 4
Max nTPM: 85.3
Min nTPM: 66.7
RHH5210_R3581
85.3
RHH5302_R3668
79.7
RHH5238_R3610
66.7
RHH5267_R3639
82.9
Memory CD4 T-cell Th1/Th17 nTPM: 78.6
Samples: 4
Max nTPM: 91.3
Min nTPM: 56.4
RHH5303_R3669
87.9
RHH5211_R3582
91.3
RHH5239_R3611
56.4
RHH5268_R3640
78.8
Memory CD4 T-cell Th17 nTPM: 79.4
Samples: 4
Max nTPM: 103.6
Min nTPM: 61.2
RHH5304_R3670
103.6
RHH5212_R3583
86.0
RHH5240_R3612
66.6
RHH5269_R3641
61.2
Memory CD4 T-cell Th2 nTPM: 68.8
Samples: 4
Max nTPM: 85.9
Min nTPM: 46.0
RHH5305_R3671
66.7
RHH5213_R3584
85.9
RHH5241_R3613
46.0
RHH5270_R3642
76.6
Naive CD4 T-cell nTPM: 76.0
Samples: 4
Max nTPM: 95.1
Min nTPM: 60.8
RHH5306_R3672
79.2
RHH5214_R3585
68.9
RHH5242_R3614
60.8
RHH5271_R3643
95.1
Naive CD8 T-cell nTPM: 79.9
Samples: 4
Max nTPM: 95.1
Min nTPM: 65.7
RHH5201_R3572
88.3
RHH5229_R3601
95.1
RHH5258_R3630
65.7
RHH5287_R3659
70.3
Non-Vd2 gdTCR nTPM: 81.1
Samples: 4
Max nTPM: 107.6
Min nTPM: 58.5
RHH5235_R3607
58.5
RHH5264_R3636
107.6
RHH5207_R3578
92.6
RHH5299_R3665
65.5
T-reg nTPM: 74.5
Samples: 4
Max nTPM: 95.7
Min nTPM: 61.8
RHH5301_R3667
61.8
RHH5237_R3609
95.7
RHH5266_R3638
63.1
RHH5209_R3580
77.4
Terminal effector memory CD4 T-cell nTPM: 75.2
Samples: 2
Max nTPM: 87.9
Min nTPM: 62.4
RHH5243_R3615
87.9
RHH5272_R3644
62.4
Terminal effector memory CD8 T-cell nTPM: 79.0
Samples: 4
Max nTPM: 99.9
Min nTPM: 51.3
RHH5232_R3604
51.3
RHH5204_R3575
69.1
RHH5261_R3633
95.7
RHH5296_R3662
99.9
Vd2 gdTCR nTPM: 74.5
Samples: 4
Max nTPM: 102.0
Min nTPM: 57.5
RHH5234_R3606
68.2
RHH5206_R3577
70.4
RHH5263_R3635
102.0
RHH5298_R3664
57.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
