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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
22.8
nTPM
Monaco:
498.1
nTPM
Schmiedel:
1172.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.8
HPA sample
nTPM
gdT-cell nTPM: 22.8
Samples: 6
Max nTPM: 43.3
Min nTPM: 13.3
P10809_1007
43.3
P10809_1022
19.4
P10809_1041
13.3
P10809_1060
23.6
P10809_1077
16.9
P10809_1098
20.5
MAIT T-cell nTPM: 20.7
Samples: 6
Max nTPM: 58.2
Min nTPM: 9.4
P10809_1006
58.2
P10809_1024
9.4
P10809_1043
16.5
P10809_1062
18.5
P10809_1083
10.0
P10809_1097
11.8
Memory CD4 T-cell nTPM: 15.3
Samples: 6
Max nTPM: 38.3
Min nTPM: 6.6
P10809_1014
38.3
P10809_1026
6.6
P10809_1045
12.3
P10809_1064
10.6
P10809_1086
9.5
P10809_1113
14.6
Memory CD8 T-cell nTPM: 18.9
Samples: 5
Max nTPM: 46.6
Min nTPM: 9.5
P10809_1012
46.6
P10809_1027
9.5
P10809_1046
14.8
P10809_1065
12.3
P10809_1111
11.3
Naive CD4 T-cell nTPM: 11.8
Samples: 6
Max nTPM: 29.1
Min nTPM: 2.5
P10809_1015
29.1
P10809_1030
7.2
P10809_1049
2.5
P10809_1068
10.4
P10809_1085
8.5
P10809_1112
12.9
Naive CD8 T-cell nTPM: 13.1
Samples: 6
Max nTPM: 34.1
Min nTPM: 7.8
P10809_1016
34.1
P10809_1031
11.2
P10809_1050
8.1
P10809_1069
7.8
P10809_1087
9.2
P10809_1110
7.9
T-reg nTPM: 18.5
Samples: 6
Max nTPM: 60.0
Min nTPM: 7.8
P10809_1018
60.0
P10809_1037
15.3
P10809_1056
8.7
P10809_1075
7.8
P10809_1094
9.6
P10809_1106
9.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
498.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 353.9
Samples: 4
Max nTPM: 396.9
Min nTPM: 296.4
RHH5202_R3573
389.6
RHH5230_R3602
296.4
RHH5259_R3631
396.9
RHH5288_R3660
332.7
Effector memory CD8 T-cell nTPM: 379.5
Samples: 4
Max nTPM: 516.3
Min nTPM: 304.8
RHH5203_R3574
339.4
RHH5231_R3603
357.3
RHH5260_R3632
516.3
RHH5289_R3661
304.8
MAIT T-cell nTPM: 308.7
Samples: 4
Max nTPM: 436.8
Min nTPM: 206.6
RHH5233_R3605
363.6
RHH5205_R3576
436.8
RHH5262_R3634
227.7
RHH5297_R3663
206.6
Memory CD4 T-cell TFH nTPM: 362.2
Samples: 4
Max nTPM: 467.5
Min nTPM: 233.2
RHH5300_R3666
295.7
RHH5236_R3608
233.2
RHH5265_R3637
452.3
RHH5208_R3579
467.5
Memory CD4 T-cell Th1 nTPM: 387.2
Samples: 4
Max nTPM: 619.5
Min nTPM: 268.6
RHH5210_R3581
359.1
RHH5302_R3668
268.6
RHH5238_R3610
619.5
RHH5267_R3639
301.4
Memory CD4 T-cell Th1/Th17 nTPM: 423.0
Samples: 4
Max nTPM: 581.7
Min nTPM: 288.8
RHH5303_R3669
305.0
RHH5211_R3582
516.6
RHH5239_R3611
581.7
RHH5268_R3640
288.8
Memory CD4 T-cell Th17 nTPM: 498.1
Samples: 4
Max nTPM: 675.5
Min nTPM: 379.3
RHH5304_R3670
379.3
RHH5212_R3583
496.6
RHH5240_R3612
675.5
RHH5269_R3641
441.1
Memory CD4 T-cell Th2 nTPM: 352.5
Samples: 4
Max nTPM: 414.7
Min nTPM: 323.3
RHH5305_R3671
341.9
RHH5213_R3584
414.7
RHH5241_R3613
329.9
RHH5270_R3642
323.3
Naive CD4 T-cell nTPM: 261.2
Samples: 4
Max nTPM: 371.8
Min nTPM: 177.2
RHH5306_R3672
236.2
RHH5214_R3585
177.2
RHH5242_R3614
371.8
RHH5271_R3643
259.6
Naive CD8 T-cell nTPM: 259.1
Samples: 4
Max nTPM: 354.9
Min nTPM: 211.0
RHH5201_R3572
211.0
RHH5229_R3601
354.9
RHH5258_R3630
237.1
RHH5287_R3659
233.3
Non-Vd2 gdTCR nTPM: 347.5
Samples: 4
Max nTPM: 386.1
Min nTPM: 286.5
RHH5235_R3607
382.1
RHH5264_R3636
335.3
RHH5207_R3578
386.1
RHH5299_R3665
286.5
T-reg nTPM: 285.9
Samples: 4
Max nTPM: 356.3
Min nTPM: 257.9
RHH5301_R3667
258.9
RHH5237_R3609
270.5
RHH5266_R3638
257.9
RHH5209_R3580
356.3
Terminal effector memory CD4 T-cell nTPM: 429.6
Samples: 2
Max nTPM: 447.7
Min nTPM: 411.5
RHH5243_R3615
447.7
RHH5272_R3644
411.5
Terminal effector memory CD8 T-cell nTPM: 381.6
Samples: 4
Max nTPM: 457.2
Min nTPM: 281.3
RHH5232_R3604
457.2
RHH5204_R3575
281.3
RHH5261_R3633
385.1
RHH5296_R3662
402.8
Vd2 gdTCR nTPM: 295.8
Samples: 4
Max nTPM: 356.8
Min nTPM: 208.5
RHH5234_R3606
298.1
RHH5206_R3577
319.7
RHH5263_R3635
356.8
RHH5298_R3664
208.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
