We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
116.7
nTPM
Monaco:
126.7
nTPM
Schmiedel:
73.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.7
HPA sample
nTPM
gdT-cell nTPM: 102.7
Samples: 6
Max nTPM: 124.1
Min nTPM: 68.7
P10809_1007
68.7
P10809_1022
110.2
P10809_1041
109.7
P10809_1060
95.4
P10809_1077
107.8
P10809_1098
124.1
MAIT T-cell nTPM: 109.1
Samples: 6
Max nTPM: 134.6
Min nTPM: 73.9
P10809_1006
73.9
P10809_1024
106.2
P10809_1043
123.6
P10809_1062
117.5
P10809_1083
99.0
P10809_1097
134.6
Memory CD4 T-cell nTPM: 101.5
Samples: 6
Max nTPM: 122.2
Min nTPM: 73.3
P10809_1014
73.3
P10809_1026
104.4
P10809_1045
105.0
P10809_1064
113.9
P10809_1086
90.2
P10809_1113
122.2
Memory CD8 T-cell nTPM: 109.0
Samples: 5
Max nTPM: 123.3
Min nTPM: 66.0
P10809_1012
66.0
P10809_1027
115.0
P10809_1046
119.1
P10809_1065
123.3
P10809_1111
121.7
Naive CD4 T-cell nTPM: 116.7
Samples: 6
Max nTPM: 139.8
Min nTPM: 74.3
P10809_1015
74.3
P10809_1030
109.7
P10809_1049
139.8
P10809_1068
139.7
P10809_1085
114.2
P10809_1112
122.3
Naive CD8 T-cell nTPM: 108.9
Samples: 6
Max nTPM: 149.4
Min nTPM: 79.2
P10809_1016
85.6
P10809_1031
79.2
P10809_1050
113.6
P10809_1069
127.3
P10809_1087
98.0
P10809_1110
149.4
T-reg nTPM: 111.2
Samples: 6
Max nTPM: 126.8
Min nTPM: 86.4
P10809_1018
86.4
P10809_1037
122.3
P10809_1056
126.8
P10809_1075
112.2
P10809_1094
97.9
P10809_1106
121.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
126.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 83.4
Samples: 4
Max nTPM: 113.4
Min nTPM: 41.9
RHH5202_R3573
87.7
RHH5230_R3602
90.5
RHH5259_R3631
41.9
RHH5288_R3660
113.4
Effector memory CD8 T-cell nTPM: 104.2
Samples: 4
Max nTPM: 129.2
Min nTPM: 75.2
RHH5203_R3574
117.4
RHH5231_R3603
129.2
RHH5260_R3632
75.2
RHH5289_R3661
94.8
MAIT T-cell nTPM: 95.0
Samples: 4
Max nTPM: 114.1
Min nTPM: 78.3
RHH5233_R3605
114.1
RHH5205_R3576
78.3
RHH5262_R3634
85.3
RHH5297_R3663
102.4
Memory CD4 T-cell TFH nTPM: 84.1
Samples: 4
Max nTPM: 124.5
Min nTPM: 58.2
RHH5300_R3666
95.3
RHH5236_R3608
124.5
RHH5265_R3637
58.2
RHH5208_R3579
58.4
Memory CD4 T-cell Th1 nTPM: 89.7
Samples: 4
Max nTPM: 114.8
Min nTPM: 62.8
RHH5210_R3581
107.7
RHH5302_R3668
114.8
RHH5238_R3610
62.8
RHH5267_R3639
73.6
Memory CD4 T-cell Th1/Th17 nTPM: 100.3
Samples: 4
Max nTPM: 147.4
Min nTPM: 56.8
RHH5303_R3669
147.4
RHH5211_R3582
130.7
RHH5239_R3611
66.3
RHH5268_R3640
56.8
Memory CD4 T-cell Th17 nTPM: 82.2
Samples: 4
Max nTPM: 123.6
Min nTPM: 47.5
RHH5304_R3670
79.7
RHH5212_R3583
123.6
RHH5240_R3612
77.9
RHH5269_R3641
47.5
Memory CD4 T-cell Th2 nTPM: 82.5
Samples: 4
Max nTPM: 99.6
Min nTPM: 53.5
RHH5305_R3671
84.2
RHH5213_R3584
92.6
RHH5241_R3613
99.6
RHH5270_R3642
53.5
Naive CD4 T-cell nTPM: 106.3
Samples: 4
Max nTPM: 118.4
Min nTPM: 85.2
RHH5306_R3672
118.4
RHH5214_R3585
117.9
RHH5242_R3614
103.8
RHH5271_R3643
85.2
Naive CD8 T-cell nTPM: 86.5
Samples: 4
Max nTPM: 114.1
Min nTPM: 53.8
RHH5201_R3572
114.1
RHH5229_R3601
53.8
RHH5258_R3630
81.5
RHH5287_R3659
96.4
Non-Vd2 gdTCR nTPM: 110.9
Samples: 4
Max nTPM: 148.5
Min nTPM: 67.8
RHH5235_R3607
67.8
RHH5264_R3636
126.1
RHH5207_R3578
101.2
RHH5299_R3665
148.5
T-reg nTPM: 87.2
Samples: 4
Max nTPM: 115.4
Min nTPM: 57.6
RHH5301_R3667
115.4
RHH5237_R3609
110.6
RHH5266_R3638
65.2
RHH5209_R3580
57.6
Terminal effector memory CD4 T-cell nTPM: 87.2
Samples: 2
Max nTPM: 101.3
Min nTPM: 73.1
RHH5243_R3615
73.1
RHH5272_R3644
101.3
Terminal effector memory CD8 T-cell nTPM: 126.7
Samples: 4
Max nTPM: 148.3
Min nTPM: 65.8
RHH5232_R3604
148.3
RHH5204_R3575
145.7
RHH5261_R3633
65.8
RHH5296_R3662
146.9
Vd2 gdTCR nTPM: 102.8
Samples: 4
Max nTPM: 133.5
Min nTPM: 52.2
RHH5234_R3606
96.7
RHH5206_R3577
133.5
RHH5263_R3635
52.2
RHH5298_R3664
128.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
