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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.4
nTPM
Monaco:
133.4
nTPM
Schmiedel:
105.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.4
HPA sample
nTPM
gdT-cell nTPM: 51.5
Samples: 6
Max nTPM: 65.5
Min nTPM: 37.8
P10809_1007
37.8
P10809_1022
65.5
P10809_1041
55.3
P10809_1060
44.6
P10809_1077
57.5
P10809_1098
48.4
MAIT T-cell nTPM: 38.3
Samples: 6
Max nTPM: 45.3
Min nTPM: 31.7
P10809_1006
35.4
P10809_1024
45.3
P10809_1043
37.3
P10809_1062
31.7
P10809_1083
39.4
P10809_1097
40.4
Memory CD4 T-cell nTPM: 37.6
Samples: 6
Max nTPM: 46.8
Min nTPM: 30.1
P10809_1014
30.1
P10809_1026
37.0
P10809_1045
36.4
P10809_1064
39.1
P10809_1086
46.8
P10809_1113
36.1
Memory CD8 T-cell nTPM: 56.2
Samples: 5
Max nTPM: 68.0
Min nTPM: 49.9
P10809_1012
49.9
P10809_1027
57.2
P10809_1046
55.6
P10809_1065
68.0
P10809_1111
50.2
Naive CD4 T-cell nTPM: 31.3
Samples: 6
Max nTPM: 41.3
Min nTPM: 23.6
P10809_1015
23.6
P10809_1030
33.6
P10809_1049
26.3
P10809_1068
41.3
P10809_1085
32.2
P10809_1112
31.0
Naive CD8 T-cell nTPM: 58.4
Samples: 6
Max nTPM: 77.9
Min nTPM: 45.3
P10809_1016
46.3
P10809_1031
50.3
P10809_1050
56.6
P10809_1069
73.8
P10809_1087
77.9
P10809_1110
45.3
T-reg nTPM: 35.1
Samples: 6
Max nTPM: 55.6
Min nTPM: 19.4
P10809_1018
29.1
P10809_1037
19.4
P10809_1056
37.0
P10809_1075
31.5
P10809_1094
37.7
P10809_1106
55.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
133.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 93.3
Samples: 4
Max nTPM: 106.0
Min nTPM: 83.1
RHH5202_R3573
106.0
RHH5230_R3602
83.1
RHH5259_R3631
94.4
RHH5288_R3660
89.8
Effector memory CD8 T-cell nTPM: 90.7
Samples: 4
Max nTPM: 109.3
Min nTPM: 71.2
RHH5203_R3574
109.3
RHH5231_R3603
80.3
RHH5260_R3632
71.2
RHH5289_R3661
102.0
MAIT T-cell nTPM: 68.1
Samples: 4
Max nTPM: 73.1
Min nTPM: 57.2
RHH5233_R3605
69.5
RHH5205_R3576
73.1
RHH5262_R3634
72.7
RHH5297_R3663
57.2
Memory CD4 T-cell TFH nTPM: 51.8
Samples: 4
Max nTPM: 56.9
Min nTPM: 45.4
RHH5300_R3666
53.4
RHH5236_R3608
45.4
RHH5265_R3637
56.9
RHH5208_R3579
51.3
Memory CD4 T-cell Th1 nTPM: 56.4
Samples: 4
Max nTPM: 64.7
Min nTPM: 45.9
RHH5210_R3581
64.7
RHH5302_R3668
63.4
RHH5238_R3610
45.9
RHH5267_R3639
51.5
Memory CD4 T-cell Th1/Th17 nTPM: 62.7
Samples: 4
Max nTPM: 69.9
Min nTPM: 54.4
RHH5303_R3669
69.9
RHH5211_R3582
54.4
RHH5239_R3611
60.1
RHH5268_R3640
66.3
Memory CD4 T-cell Th17 nTPM: 58.6
Samples: 4
Max nTPM: 76.2
Min nTPM: 46.7
RHH5304_R3670
61.0
RHH5212_R3583
46.7
RHH5240_R3612
50.3
RHH5269_R3641
76.2
Memory CD4 T-cell Th2 nTPM: 79.6
Samples: 4
Max nTPM: 93.1
Min nTPM: 73.5
RHH5305_R3671
73.7
RHH5213_R3584
78.0
RHH5241_R3613
93.1
RHH5270_R3642
73.5
Naive CD4 T-cell nTPM: 62.6
Samples: 4
Max nTPM: 72.8
Min nTPM: 57.7
RHH5306_R3672
57.7
RHH5214_R3585
61.8
RHH5242_R3614
72.8
RHH5271_R3643
58.1
Naive CD8 T-cell nTPM: 133.4
Samples: 4
Max nTPM: 139.4
Min nTPM: 127.6
RHH5201_R3572
127.6
RHH5229_R3601
139.4
RHH5258_R3630
135.6
RHH5287_R3659
131.0
Non-Vd2 gdTCR nTPM: 53.7
Samples: 4
Max nTPM: 60.4
Min nTPM: 44.6
RHH5235_R3607
50.1
RHH5264_R3636
44.6
RHH5207_R3578
59.6
RHH5299_R3665
60.4
T-reg nTPM: 54.3
Samples: 4
Max nTPM: 61.9
Min nTPM: 46.5
RHH5301_R3667
56.1
RHH5237_R3609
61.9
RHH5266_R3638
46.5
RHH5209_R3580
52.8
Terminal effector memory CD4 T-cell nTPM: 80.3
Samples: 2
Max nTPM: 85.1
Min nTPM: 75.4
RHH5243_R3615
75.4
RHH5272_R3644
85.1
Terminal effector memory CD8 T-cell nTPM: 73.3
Samples: 4
Max nTPM: 93.9
Min nTPM: 44.2
RHH5232_R3604
83.7
RHH5204_R3575
71.4
RHH5261_R3633
44.2
RHH5296_R3662
93.9
Vd2 gdTCR nTPM: 72.7
Samples: 4
Max nTPM: 83.4
Min nTPM: 62.9
RHH5234_R3606
83.4
RHH5206_R3577
73.5
RHH5263_R3635
62.9
RHH5298_R3664
70.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
