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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
53.8
nTPM
Monaco:
140.9
nTPM
Schmiedel:
70.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.8
HPA sample
nTPM
gdT-cell nTPM: 48.2
Samples: 6
Max nTPM: 63.1
Min nTPM: 33.0
P10809_1007
63.1
P10809_1022
33.0
P10809_1041
51.5
P10809_1060
51.5
P10809_1077
49.9
P10809_1098
40.2
MAIT T-cell nTPM: 42.6
Samples: 6
Max nTPM: 57.5
Min nTPM: 26.2
P10809_1006
28.7
P10809_1024
26.2
P10809_1043
56.9
P10809_1062
57.5
P10809_1083
54.6
P10809_1097
31.5
Memory CD4 T-cell nTPM: 50.7
Samples: 6
Max nTPM: 65.3
Min nTPM: 30.8
P10809_1014
30.8
P10809_1026
65.3
P10809_1045
57.9
P10809_1064
50.7
P10809_1086
43.8
P10809_1113
55.5
Memory CD8 T-cell nTPM: 44.6
Samples: 5
Max nTPM: 60.6
Min nTPM: 22.9
P10809_1012
22.9
P10809_1027
57.8
P10809_1046
60.6
P10809_1065
47.5
P10809_1111
34.2
Naive CD4 T-cell nTPM: 53.0
Samples: 6
Max nTPM: 68.6
Min nTPM: 41.7
P10809_1015
41.7
P10809_1030
68.6
P10809_1049
64.3
P10809_1068
45.9
P10809_1085
42.2
P10809_1112
55.0
Naive CD8 T-cell nTPM: 53.8
Samples: 6
Max nTPM: 78.4
Min nTPM: 43.9
P10809_1016
43.9
P10809_1031
78.4
P10809_1050
61.5
P10809_1069
49.5
P10809_1087
44.2
P10809_1110
45.1
T-reg nTPM: 29.6
Samples: 6
Max nTPM: 45.7
Min nTPM: 19.8
P10809_1018
21.0
P10809_1037
39.3
P10809_1056
19.8
P10809_1075
45.7
P10809_1094
30.2
P10809_1106
21.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
140.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 140.9
Samples: 4
Max nTPM: 152.6
Min nTPM: 125.3
RHH5202_R3573
152.6
RHH5230_R3602
144.3
RHH5259_R3631
141.5
RHH5288_R3660
125.3
Effector memory CD8 T-cell nTPM: 89.1
Samples: 4
Max nTPM: 108.5
Min nTPM: 75.3
RHH5203_R3574
75.3
RHH5231_R3603
78.6
RHH5260_R3632
108.5
RHH5289_R3661
93.8
MAIT T-cell nTPM: 101.4
Samples: 4
Max nTPM: 145.3
Min nTPM: 76.8
RHH5233_R3605
145.3
RHH5205_R3576
102.3
RHH5262_R3634
81.1
RHH5297_R3663
76.8
Memory CD4 T-cell TFH nTPM: 117.6
Samples: 4
Max nTPM: 146.8
Min nTPM: 67.0
RHH5300_R3666
135.5
RHH5236_R3608
67.0
RHH5265_R3637
120.9
RHH5208_R3579
146.8
Memory CD4 T-cell Th1 nTPM: 127.5
Samples: 4
Max nTPM: 183.2
Min nTPM: 84.0
RHH5210_R3581
153.9
RHH5302_R3668
84.0
RHH5238_R3610
183.2
RHH5267_R3639
88.8
Memory CD4 T-cell Th1/Th17 nTPM: 107.8
Samples: 4
Max nTPM: 135.1
Min nTPM: 78.4
RHH5303_R3669
78.4
RHH5211_R3582
87.9
RHH5239_R3611
129.8
RHH5268_R3640
135.1
Memory CD4 T-cell Th17 nTPM: 116.7
Samples: 4
Max nTPM: 140.0
Min nTPM: 85.8
RHH5304_R3670
140.0
RHH5212_R3583
85.8
RHH5240_R3612
117.6
RHH5269_R3641
123.3
Memory CD4 T-cell Th2 nTPM: 115.7
Samples: 4
Max nTPM: 144.7
Min nTPM: 99.1
RHH5305_R3671
144.7
RHH5213_R3584
99.1
RHH5241_R3613
111.4
RHH5270_R3642
107.4
Naive CD4 T-cell nTPM: 121.8
Samples: 4
Max nTPM: 174.1
Min nTPM: 88.3
RHH5306_R3672
120.1
RHH5214_R3585
88.3
RHH5242_R3614
174.1
RHH5271_R3643
104.8
Naive CD8 T-cell nTPM: 131.6
Samples: 4
Max nTPM: 148.7
Min nTPM: 120.1
RHH5201_R3572
120.1
RHH5229_R3601
148.7
RHH5258_R3630
128.9
RHH5287_R3659
128.7
Non-Vd2 gdTCR nTPM: 91.1
Samples: 4
Max nTPM: 121.0
Min nTPM: 67.1
RHH5235_R3607
121.0
RHH5264_R3636
67.1
RHH5207_R3578
89.7
RHH5299_R3665
86.5
T-reg nTPM: 92.8
Samples: 4
Max nTPM: 105.4
Min nTPM: 70.6
RHH5301_R3667
99.3
RHH5237_R3609
70.6
RHH5266_R3638
95.9
RHH5209_R3580
105.4
Terminal effector memory CD4 T-cell nTPM: 96.9
Samples: 2
Max nTPM: 98.2
Min nTPM: 95.5
RHH5243_R3615
98.2
RHH5272_R3644
95.5
Terminal effector memory CD8 T-cell nTPM: 95.7
Samples: 4
Max nTPM: 102.7
Min nTPM: 84.0
RHH5232_R3604
102.7
RHH5204_R3575
102.5
RHH5261_R3633
84.0
RHH5296_R3662
93.4
Vd2 gdTCR nTPM: 87.4
Samples: 4
Max nTPM: 100.2
Min nTPM: 75.6
RHH5234_R3606
100.2
RHH5206_R3577
88.1
RHH5263_R3635
75.6
RHH5298_R3664
85.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
