HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:27.7 nTPM
HPA Brain:31.3 nTPM
GTEx:27.7 nTPM
FANTOM5:47.2 Scaled Tags Per Million
Pig:4.3 nTPM
Mouse:37.2 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048791
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.3
Sample id Sample description nTPM
Hippocampus
nTPM: 27.4
1898 Male, age 80, left hemisphere 31.9
1911 Female, age 85, right hemisphere 27.7
2621 Female, age 67, right hemisphere 26.8
1855 Male, age 76, left hemisphere 26.5
2529 Female, age 94, left hemisphere 26.4
2148 Female, age 91, left hemisphere 25.4
Dentate gyrus
nTPM: 28.3
2010 Male, age 76, both hemispheres 34.6
2530 Female, age 94, left hemisphere 33.5
1927 Female, age 91, both hemispheres 27.7
2528 Male, age 74, both hemispheres 26.7
2246 Female, age 85, both hemispheres 25.4
2531 Female, age 67, both hemispheres 21.9
Entorhinal gyrus
nTPM: 27.4
2764 Male, age 80, right hemisphere 30.1
2613 Female, age 94, left hemisphere 28.6
1787 Male, age 76, left hemisphere 27.7
1938 Female, age 85, left hemisphere 27.7
2117 Female, age 91, right hemisphere 25.6
2686 Male, age 75, right hemisphere 24.5
Hippocampus, CA1
nTPM: 31.3
2749 Male, age 80, left hemisphere 34.5
1873 Female, age 85, both hemispheres 33.0
2082 Female, age 91, right hemisphere 32.3
2045 Male, age 76, both hemispheres 30.1
2527 Male, age 74, both hemispheres 26.8
Hippocampus, CA2
nTPM: 31.1
2249 Male, age 74, both hemispheres 38.1
1963 Male, age 80, left hemisphere 32.5
1892 Male, age 76, both hemispheres 32.3
1940 Female, age 85, left hemisphere 29.5
2113 Female, age 91, right hemisphere 27.9
2437 Female, age 94, left hemisphere 26.4
Hippocampus, CA3
nTPM: 28.0
2436 Male, age 74, both hemispheres 37.5
1867 Male, age 76, both hemispheres 28.9
2137 Male, age 80, left hemisphere 26.9
1891 Female, age 85, both hemispheres 25.7
2620 Female, age 94, left hemisphere 24.9
2861 Female, age 67, both hemispheres 24.0
Parahippocampal cortex
nTPM: 26.1
2245 Female, age 91, both hemispheres 30.3
2692 Male, age 74, both hemispheres 29.3
1933 Female, age 85, both hemispheres 28.8
1990 Female, age 91, right hemisphere 26.4
2018 Male, age 76, both hemispheres 26.1
2250 Female, age 67, right hemisphere 26.1
1850 Male, age 80, both hemispheres 25.8
2622 Female, age 67, right hemisphere 23.4
2532 Female, age 72, left hemisphere 23.2
2693 Female, age 94, both hemispheres 21.4
Perirhinal gyrus
nTPM: 27.1
1847 Female, age 91, left hemisphere 34.7
1794 Male, age 80, right hemisphere 27.5
1841 Female, age 85, right hemisphere 25.5
2848 Male, age 76, right hemisphere 24.2
2521 Female, age 94, right hemisphere 23.4
Subiculum
nTPM: 25.8
2619 Male, age 74, both hemispheres 31.6
1977 Female, age 85, both hemispheres 28.1
2042 Male, age 76, both hemispheres 27.5
1901 Male, age 80, both hemispheres 27.4
2729 Female, age 91, right hemisphere 24.4
2438 Female, age 94, left hemisphere 15.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.7
Samples: 197

Max nTPM: 63.3
Min nTPM: 8.9
Std nTPM: 7.7
Median nTPM: 26.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 63.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 56.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 53.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 52.5
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 48.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 47.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 46.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 43.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 43.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 42.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 41.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.2
FF:10169-103B7 60 years, female 51.9
FF:10153-102I9 76 years, female 42.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.3
Pig sample Sample description nTPM
Subiculum
nTPM: 4.3
Samples: 4

Max nTPM: 6.1
Min nTPM: 3.5
Sample A Female 3.9
Sample B Female 6.1
Sample C Male 3.5
Sample D Male 3.7
Dorsal hippocampus
nTPM: 3.8
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.1
Sample A Female 3.4
Sample B Female 4.9
Sample C Male 3.7
Sample D Male 3.1
Entorhinal cortex
nTPM: 4.0
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.3
Sample A Female 3.9
Sample B Female 5.0
Sample C Male 3.7
Sample D Male 3.3
Ventral hippocampus
nTPM: 4.0
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.2
Sample A Female 3.8
Sample B Female 5.1
Sample C Male 3.9
Sample D Male 3.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.2
Samples: 4

Max nTPM: 39.9
Min nTPM: 32.6
Sample A Male 38.0
Sample B Male 38.4
Sample C Female 39.9
Sample D Female 32.6
Hippocampal formation
nTPM: 32.5
Samples: 4

Max nTPM: 36.3
Min nTPM: 29.3
Sample A Male 35.0
Sample B Male 29.4
Sample C Female 29.3
Sample D Female 36.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
75695629 Antisense, RP_060518_04_A12, Mouse strain C57BL/6J (56 days, male) 1.3

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