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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
213.0
nTPM
FANTOM5:
134.4
Scaled Tags Per Million
Pig:
241.8
nTPM
Allen mouse:
9.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
213.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 177.8
2301
Female, age 85, both hemispheres
254.3
1984
Male, age 76, both hemispheres
252.6
2090
Male, age 80, both hemispheres
111.5
2188
Female, age 91, both hemispheres
92.7
Dorsal cochlear nucleus nTPM: 173.8
2802
Male, age 74, right hemisphere
326.7
2187
Female, age 91, both hemispheres
170.8
2378
Male, age 80, both hemispheres
161.9
2370
Male, age 61, both hemispheres
129.1
2058
Male, age 76, both hemispheres
80.7
Dorsal tegmental nucleus nTPM: 69.7
2083
Male, age 80, both hemispheres
92.7
1936
Male, age 76, left hemisphere
70.7
2326
Male, age 74, both hemispheres
59.8
2358
Male, age 61, both hemispheres
55.4
Dorsolateral tegmental area nTPM: 50.0
2751
Female, age 85, both hemispheres
71.4
2654
Male, age 80, both hemispheres
63.6
2360
Male, age 74, both hemispheres
47.7
2141
Male, age 76, both hemispheres
36.5
2337
Male, age 61, both hemispheres
30.9
Kolliker-Fuse nucleus nTPM: 116.2
2163
Male, age 80, both hemispheres
243.3
2793
Female, age 91, left hemisphere
82.6
2315
Male, age 76, right hemisphere
22.7
Lateral lemniscal nuclei nTPM: 116.8
2453
Male, age 74, right hemisphere
172.3
2169
Male, age 76, both hemispheres
134.9
2036
Male, age 80, both hemispheres
111.8
2320
Female, age 91, left hemisphere
86.4
2746
Female, age 85, left hemisphere
78.8
Lateral parabrachial nucleus nTPM: 88.2
2139
Female, age 85, right hemisphere
151.4
2013
Male, age 80, both hemispheres
95.8
2790
Male, age 61, both hemispheres
75.2
2792
Male, age 76, both hemispheres
30.6
Lateral vestibular nucleus nTPM: 159.8
2184
Male, age 76, both hemispheres
202.3
2311
Male, age 80, both hemispheres
117.2
Locus coeruleus nTPM: 38.1
2720
Male, age 74, both hemispheres
105.6
2123
Female, age 91, both hemispheres
103.6
2162
Male, age 80, both hemispheres
18.3
2788
Male, age 74, unknown
11.9
2317
Female, age 72, unknown
11.2
2014
Male, age 55, unknown
9.4
1980
Male, age 76, both hemispheres
6.8
Medial parabrachial nucleus nTPM: 159.8
2170
Female, age 91, both hemispheres
290.1
2854
Male, age 80, both hemispheres
216.7
2786
Male, age 76, both hemispheres
111.6
2156
Male, age 61, both hemispheres
97.6
2463
Female, age 85, right hemisphere
83.0
Medial periolivary nuclei nTPM: 114.6
2171
Female, age 85, both hemispheres
298.6
2063
Male, age 76, both hemispheres
81.0
2458
Female, age 91, both hemispheres
75.7
2791
Male, age 74, right hemisphere
71.4
2081
Male, age 80, both hemispheres
46.3
Motor facial nucleus nTPM: 99.6
2697
Female, age 85, both hemispheres
136.4
2126
Male, age 61, both hemispheres
134.9
2365
Male, age 74, right hemisphere
105.2
2062
Male, age 76, both hemispheres
104.9
2327
Male, age 80, both hemispheres
66.0
2795
Female, age 91, both hemispheres
49.9
Motor trigeminal nucleus nTPM: 76.0
2560
Male, age 74, both hemispheres
121.7
2079
Male, age 80, both hemispheres
88.6
2321
Female, age 91, both hemispheres
79.8
2335
Male, age 61, both hemispheres
46.2
2309
Male, age 76, both hemispheres
43.8
Nuclei of the trapezoid body nTPM: 101.2
2159
Male, age 61, both hemispheres
154.4
2735
Female, age 85, both hemispheres
144.6
1983
Male, age 76, both hemispheres
75.9
2166
Male, age 80, both hemispheres
70.0
2368
Female, age 91, both hemispheres
61.3
Nucleus raphe magnus nTPM: 123.4
2160
Male, age 61, both hemispheres
219.2
2172
Female, age 85, both hemispheres
194.7
2455
Male, age 74, both hemispheres
109.9
2328
Male, age 80, both hemispheres
86.7
2051
Male, age 76, both hemispheres
65.2
2459
Female, age 91, both hemispheres
64.7
Paramedian reticular nucleus nTPM: 94.6
2050
Female, age 85, both hemispheres
237.8
2052
Male, age 76, both hemispheres
49.2
2057
Male, age 80, both hemispheres
48.0
2313
Male, age 61, both hemispheres
43.2
Pedunculopontine tegmental nucleus nTPM: 80.7
1921
Female, age 85, both hemispheres
125.0
2338
Male, age 61, both hemispheres
82.2
2334
Male, age 80, both hemispheres
35.0
Pontine nuclei nTPM: 108.4
2727
Male, age 61, right hemisphere
239.7
2787
Female, age 85, both hemispheres
163.8
1968
Male, age 76, left hemisphere
89.7
2454
Male, age 74, left hemisphere
86.2
1863
Male, age 55, unknown
83.7
2115
Male, age 80, left hemisphere
80.6
2109
Female, age 72, unknown
62.8
2319
Female, age 91, both hemispheres
60.5
Pontine raphe nucleus nTPM: 57.4
2122
Female, age 85, midline
106.2
2853
Male, age 76, midline
8.5
Posteroventral cochlear nucleus nTPM: 162.3
2341
Male, age 80, both hemispheres
300.8
2752
Female, age 85, both hemispheres
189.3
2371
Male, age 61, both hemispheres
141.6
2070
Male, age 76, both hemispheres
140.2
2135
Female, age 91, both hemispheres
39.8
Principal sensory trigeminal nucleus nTPM: 142.5
2324
Male, age 76, both hemispheres
199.9
2158
Male, age 61, both hemispheres
188.6
2008
Male, age 80, left hemisphere
120.1
2367
Female, age 91, left hemisphere
61.5
Reticular pontine nucleus, caudal nTPM: 71.4
2332
Male, age 80, right hemisphere
102.2
2559
Male, age 74, both hemispheres
89.9
2092
Male, age 76, both hemispheres
59.6
2457
Female, age 91, both hemispheres
34.0
Reticular pontine nucleus, oral nTPM: 77.8
2361
Male, age 74, both hemispheres
173.3
2012
Female, age 85, both hemispheres
77.6
1939
Male, age 80, both hemispheres
53.9
2366
Female, age 91, both hemispheres
52.9
2167
Male, age 76, both hemispheres
31.2
Reticulotegmental nucleus nTPM: 136.9
2322
Female, age 91, both hemispheres
176.7
2452
Male, age 74, both hemispheres
163.4
2333
Male, age 80, both hemispheres
134.7
2325
Male, age 76, both hemispheres
72.6
Spinal trigeminal nucleus, oral nTPM: 213.0
2737
Female, age 85, both hemispheres
290.3
2164
Male, age 80, both hemispheres
286.8
1978
Male, age 76, both hemispheres
61.8
Subcoeruleus area nTPM: 55.3
1958
Male, age 80, both hemispheres
68.8
2451
Male, age 74, both hemispheres
68.0
2089
Male, age 76, left hemisphere
59.4
2369
Female, age 85, left hemisphere
41.5
2323
Female, age 91, left hemisphere
38.6
Superior olive nTPM: 78.2
1875
Female, age 85, both hemispheres
127.5
2329
Male, age 80, right hemisphere
88.7
2561
Female, age 91, both hemispheres
77.5
2364
Male, age 74, right hemisphere
60.2
2020
Male, age 76, both hemispheres
37.3
Ventral periolivary nuclei nTPM: 104.5
2130
Female, age 85, both hemispheres
174.8
2165
Male, age 80, both hemispheres
110.4
2794
Female, age 91, left hemisphere
105.6
2023
Male, age 76, both hemispheres
27.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 96.5
2840
Female, age 85, both hemispheres
250.1
2449
Male, age 74, both hemispheres
126.5
2456
Female, age 91, both hemispheres
64.6
2161
Male, age 80, both hemispheres
63.3
1959
Male, age 76, both hemispheres
46.6
2359
Male, age 61, both hemispheres
27.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
241.8
Pig sample
Sample description
nTPM
Pons nTPM: 241.8
Samples: 4
Max nTPM: 556.8
Min nTPM: 96.4
Sample A
Female
556.8
Sample B
Female
96.4
Sample C
Male
121.6
Sample D
Male
192.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
