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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.6
nTPM
Monaco:
69.8
nTPM
Schmiedel:
187.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.6
HPA sample
nTPM
gdT-cell nTPM: 2.3
Samples: 6
Max nTPM: 4.2
Min nTPM: 0.2
P10809_1007
1.9
P10809_1022
4.2
P10809_1041
0.2
P10809_1060
0.9
P10809_1077
2.8
P10809_1098
3.8
MAIT T-cell nTPM: 9.9
Samples: 6
Max nTPM: 21.6
Min nTPM: 2.6
P10809_1006
8.1
P10809_1024
12.8
P10809_1043
9.4
P10809_1062
2.6
P10809_1083
4.7
P10809_1097
21.6
Memory CD4 T-cell nTPM: 32.1
Samples: 6
Max nTPM: 56.5
Min nTPM: 13.2
P10809_1014
29.3
P10809_1026
30.5
P10809_1045
44.5
P10809_1064
18.6
P10809_1086
13.2
P10809_1113
56.5
Memory CD8 T-cell nTPM: 6.9
Samples: 5
Max nTPM: 11.2
Min nTPM: 3.6
P10809_1012
11.2
P10809_1027
5.2
P10809_1046
5.3
P10809_1065
3.6
P10809_1111
9.1
Naive CD4 T-cell nTPM: 1.9
Samples: 6
Max nTPM: 4.3
Min nTPM: 0.2
P10809_1015
2.1
P10809_1030
2.0
P10809_1049
1.1
P10809_1068
0.2
P10809_1085
4.3
P10809_1112
1.8
Naive CD8 T-cell nTPM: 2.1
Samples: 6
Max nTPM: 3.2
Min nTPM: 0.2
P10809_1016
0.2
P10809_1031
3.2
P10809_1050
2.4
P10809_1069
1.9
P10809_1087
2.3
P10809_1110
2.4
T-reg nTPM: 96.6
Samples: 6
Max nTPM: 121.4
Min nTPM: 70.8
P10809_1018
78.6
P10809_1037
110.2
P10809_1056
113.9
P10809_1075
84.5
P10809_1094
70.8
P10809_1106
121.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.3
Samples: 4
Max nTPM: 10.9
Min nTPM: 5.2
RHH5202_R3573
10.1
RHH5230_R3602
10.8
RHH5259_R3631
10.9
RHH5288_R3660
5.2
Effector memory CD8 T-cell nTPM: 8.8
Samples: 4
Max nTPM: 11.9
Min nTPM: 3.5
RHH5203_R3574
11.9
RHH5231_R3603
9.4
RHH5260_R3632
10.4
RHH5289_R3661
3.5
MAIT T-cell nTPM: 7.9
Samples: 4
Max nTPM: 12.4
Min nTPM: 3.4
RHH5233_R3605
12.4
RHH5205_R3576
3.4
RHH5262_R3634
11.1
RHH5297_R3663
4.8
Memory CD4 T-cell TFH nTPM: 28.4
Samples: 4
Max nTPM: 37.5
Min nTPM: 11.4
RHH5300_R3666
27.9
RHH5236_R3608
36.9
RHH5265_R3637
37.5
RHH5208_R3579
11.4
Memory CD4 T-cell Th1 nTPM: 27.8
Samples: 4
Max nTPM: 52.7
Min nTPM: 8.1
RHH5210_R3581
8.1
RHH5302_R3668
20.1
RHH5238_R3610
30.3
RHH5267_R3639
52.7
Memory CD4 T-cell Th1/Th17 nTPM: 40.2
Samples: 4
Max nTPM: 52.8
Min nTPM: 29.2
RHH5303_R3669
41.3
RHH5211_R3582
37.3
RHH5239_R3611
29.2
RHH5268_R3640
52.8
Memory CD4 T-cell Th17 nTPM: 31.4
Samples: 4
Max nTPM: 34.4
Min nTPM: 28.5
RHH5304_R3670
28.5
RHH5212_R3583
28.5
RHH5240_R3612
34.0
RHH5269_R3641
34.4
Memory CD4 T-cell Th2 nTPM: 27.4
Samples: 4
Max nTPM: 47.1
Min nTPM: 14.2
RHH5305_R3671
16.0
RHH5213_R3584
32.1
RHH5241_R3613
14.2
RHH5270_R3642
47.1
Naive CD4 T-cell nTPM: 0.7
Samples: 4
Max nTPM: 1.6
Min nTPM: 0.0
RHH5306_R3672
1.6
RHH5214_R3585
1.1
RHH5242_R3614
0.0
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 0.5
Samples: 4
Max nTPM: 1.8
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
1.8
RHH5258_R3630
0.0
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 1.7
Samples: 4
Max nTPM: 3.2
Min nTPM: 0.3
RHH5235_R3607
3.2
RHH5264_R3636
1.1
RHH5207_R3578
2.2
RHH5299_R3665
0.3
T-reg nTPM: 69.8
Samples: 4
Max nTPM: 115.6
Min nTPM: 40.4
RHH5301_R3667
58.0
RHH5237_R3609
115.6
RHH5266_R3638
65.3
RHH5209_R3580
40.4
Terminal effector memory CD4 T-cell nTPM: 3.4
Samples: 2
Max nTPM: 6.3
Min nTPM: 0.4
RHH5243_R3615
0.4
RHH5272_R3644
6.3
Terminal effector memory CD8 T-cell nTPM: 3.4
Samples: 4
Max nTPM: 10.6
Min nTPM: 0.0
RHH5232_R3604
0.7
RHH5204_R3575
2.1
RHH5261_R3633
10.6
RHH5296_R3662
0.0
Vd2 gdTCR nTPM: 2.0
Samples: 4
Max nTPM: 4.7
Min nTPM: 0.2
RHH5234_R3606
2.6
RHH5206_R3577
0.4
RHH5263_R3635
4.7
RHH5298_R3664
0.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
