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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
161.6
nTPM
Monaco:
293.5
nTPM
Schmiedel:
120.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
161.6
HPA sample
nTPM
gdT-cell nTPM: 65.6
Samples: 6
Max nTPM: 93.7
Min nTPM: 52.6
P10809_1007
65.0
P10809_1022
93.7
P10809_1041
52.6
P10809_1060
57.0
P10809_1077
61.1
P10809_1098
64.2
MAIT T-cell nTPM: 105.8
Samples: 6
Max nTPM: 128.5
Min nTPM: 85.4
P10809_1006
122.4
P10809_1024
128.5
P10809_1043
88.3
P10809_1062
90.5
P10809_1083
85.4
P10809_1097
119.5
Memory CD4 T-cell nTPM: 107.0
Samples: 6
Max nTPM: 126.3
Min nTPM: 82.1
P10809_1014
119.5
P10809_1026
126.2
P10809_1045
126.3
P10809_1064
83.8
P10809_1086
82.1
P10809_1113
103.8
Memory CD8 T-cell nTPM: 80.2
Samples: 5
Max nTPM: 90.3
Min nTPM: 68.2
P10809_1012
90.3
P10809_1027
68.2
P10809_1046
88.6
P10809_1065
72.9
P10809_1111
80.9
Naive CD4 T-cell nTPM: 161.6
Samples: 6
Max nTPM: 205.5
Min nTPM: 123.4
P10809_1015
205.5
P10809_1030
186.4
P10809_1049
142.9
P10809_1068
166.4
P10809_1085
123.4
P10809_1112
144.7
Naive CD8 T-cell nTPM: 122.1
Samples: 6
Max nTPM: 178.5
Min nTPM: 64.5
P10809_1016
178.5
P10809_1031
141.1
P10809_1050
110.4
P10809_1069
104.9
P10809_1087
64.5
P10809_1110
132.9
T-reg nTPM: 91.5
Samples: 6
Max nTPM: 99.8
Min nTPM: 80.9
P10809_1018
98.6
P10809_1037
95.6
P10809_1056
83.3
P10809_1075
90.7
P10809_1094
80.9
P10809_1106
99.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
293.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 173.4
Samples: 4
Max nTPM: 197.5
Min nTPM: 152.9
RHH5202_R3573
179.0
RHH5230_R3602
197.5
RHH5259_R3631
152.9
RHH5288_R3660
164.3
Effector memory CD8 T-cell nTPM: 159.6
Samples: 4
Max nTPM: 175.9
Min nTPM: 137.5
RHH5203_R3574
158.3
RHH5231_R3603
166.6
RHH5260_R3632
137.5
RHH5289_R3661
175.9
MAIT T-cell nTPM: 192.4
Samples: 4
Max nTPM: 200.7
Min nTPM: 188.2
RHH5233_R3605
188.2
RHH5205_R3576
191.9
RHH5262_R3634
200.7
RHH5297_R3663
188.9
Memory CD4 T-cell TFH nTPM: 172.2
Samples: 4
Max nTPM: 195.9
Min nTPM: 128.6
RHH5300_R3666
128.6
RHH5236_R3608
195.9
RHH5265_R3637
187.3
RHH5208_R3579
177.0
Memory CD4 T-cell Th1 nTPM: 192.1
Samples: 4
Max nTPM: 209.1
Min nTPM: 176.8
RHH5210_R3581
187.2
RHH5302_R3668
209.1
RHH5238_R3610
176.8
RHH5267_R3639
195.3
Memory CD4 T-cell Th1/Th17 nTPM: 160.0
Samples: 4
Max nTPM: 179.1
Min nTPM: 129.6
RHH5303_R3669
174.2
RHH5211_R3582
179.1
RHH5239_R3611
157.0
RHH5268_R3640
129.6
Memory CD4 T-cell Th17 nTPM: 186.5
Samples: 4
Max nTPM: 221.5
Min nTPM: 147.5
RHH5304_R3670
180.2
RHH5212_R3583
196.9
RHH5240_R3612
221.5
RHH5269_R3641
147.5
Memory CD4 T-cell Th2 nTPM: 216.4
Samples: 4
Max nTPM: 268.9
Min nTPM: 180.9
RHH5305_R3671
220.6
RHH5213_R3584
180.9
RHH5241_R3613
268.9
RHH5270_R3642
195.0
Naive CD4 T-cell nTPM: 261.5
Samples: 4
Max nTPM: 303.5
Min nTPM: 216.7
RHH5306_R3672
256.6
RHH5214_R3585
216.7
RHH5242_R3614
303.5
RHH5271_R3643
269.3
Naive CD8 T-cell nTPM: 293.5
Samples: 4
Max nTPM: 351.4
Min nTPM: 235.0
RHH5201_R3572
351.4
RHH5229_R3601
235.0
RHH5258_R3630
302.9
RHH5287_R3659
284.8
Non-Vd2 gdTCR nTPM: 153.4
Samples: 4
Max nTPM: 189.9
Min nTPM: 119.4
RHH5235_R3607
158.1
RHH5264_R3636
146.1
RHH5207_R3578
189.9
RHH5299_R3665
119.4
T-reg nTPM: 198.5
Samples: 4
Max nTPM: 211.2
Min nTPM: 178.1
RHH5301_R3667
178.1
RHH5237_R3609
211.2
RHH5266_R3638
205.6
RHH5209_R3580
199.1
Terminal effector memory CD4 T-cell nTPM: 175.5
Samples: 2
Max nTPM: 178.3
Min nTPM: 172.7
RHH5243_R3615
172.7
RHH5272_R3644
178.3
Terminal effector memory CD8 T-cell nTPM: 151.1
Samples: 4
Max nTPM: 165.3
Min nTPM: 132.0
RHH5232_R3604
165.3
RHH5204_R3575
159.4
RHH5261_R3633
132.0
RHH5296_R3662
147.7
Vd2 gdTCR nTPM: 158.9
Samples: 4
Max nTPM: 188.9
Min nTPM: 135.7
RHH5234_R3606
167.4
RHH5206_R3577
135.7
RHH5263_R3635
188.9
RHH5298_R3664
143.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
