We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.8
nTPM
Monaco:
448.9
nTPM
Schmiedel:
413.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.8
HPA sample
nTPM
gdT-cell nTPM: 49.8
Samples: 6
Max nTPM: 79.7
Min nTPM: 35.0
P10809_1007
79.7
P10809_1022
44.8
P10809_1041
43.5
P10809_1060
35.0
P10809_1077
40.4
P10809_1098
55.3
MAIT T-cell nTPM: 26.5
Samples: 6
Max nTPM: 63.5
Min nTPM: 13.7
P10809_1006
63.5
P10809_1024
17.4
P10809_1043
20.8
P10809_1062
17.8
P10809_1083
13.7
P10809_1097
25.9
Memory CD4 T-cell nTPM: 10.9
Samples: 6
Max nTPM: 21.5
Min nTPM: 6.9
P10809_1014
21.5
P10809_1026
8.9
P10809_1045
6.9
P10809_1064
9.8
P10809_1086
8.8
P10809_1113
9.5
Memory CD8 T-cell nTPM: 28.1
Samples: 5
Max nTPM: 47.9
Min nTPM: 14.4
P10809_1012
47.9
P10809_1027
24.6
P10809_1046
27.1
P10809_1065
14.4
P10809_1111
26.3
Naive CD4 T-cell nTPM: 3.5
Samples: 6
Max nTPM: 7.4
Min nTPM: 1.1
P10809_1015
7.4
P10809_1030
2.1
P10809_1049
1.1
P10809_1068
2.1
P10809_1085
6.0
P10809_1112
2.0
Naive CD8 T-cell nTPM: 14.2
Samples: 6
Max nTPM: 23.5
Min nTPM: 7.5
P10809_1016
22.4
P10809_1031
7.5
P10809_1050
12.2
P10809_1069
10.4
P10809_1087
23.5
P10809_1110
9.3
T-reg nTPM: 24.5
Samples: 6
Max nTPM: 68.6
Min nTPM: 11.9
P10809_1018
68.6
P10809_1037
13.4
P10809_1056
14.1
P10809_1075
11.9
P10809_1094
20.3
P10809_1106
18.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
448.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 217.1
Samples: 4
Max nTPM: 275.8
Min nTPM: 143.5
RHH5202_R3573
275.8
RHH5230_R3602
143.5
RHH5259_R3631
241.9
RHH5288_R3660
207.2
Effector memory CD8 T-cell nTPM: 324.7
Samples: 4
Max nTPM: 358.4
Min nTPM: 287.9
RHH5203_R3574
343.9
RHH5231_R3603
308.7
RHH5260_R3632
358.4
RHH5289_R3661
287.9
MAIT T-cell nTPM: 199.6
Samples: 4
Max nTPM: 245.0
Min nTPM: 164.1
RHH5233_R3605
193.4
RHH5205_R3576
245.0
RHH5262_R3634
195.8
RHH5297_R3663
164.1
Memory CD4 T-cell TFH nTPM: 92.7
Samples: 4
Max nTPM: 132.4
Min nTPM: 67.1
RHH5300_R3666
67.1
RHH5236_R3608
71.2
RHH5265_R3637
100.1
RHH5208_R3579
132.4
Memory CD4 T-cell Th1 nTPM: 107.9
Samples: 4
Max nTPM: 156.2
Min nTPM: 70.3
RHH5210_R3581
70.3
RHH5302_R3668
91.3
RHH5238_R3610
156.2
RHH5267_R3639
113.7
Memory CD4 T-cell Th1/Th17 nTPM: 106.8
Samples: 4
Max nTPM: 134.4
Min nTPM: 86.8
RHH5303_R3669
86.8
RHH5211_R3582
111.4
RHH5239_R3611
134.4
RHH5268_R3640
94.5
Memory CD4 T-cell Th17 nTPM: 83.1
Samples: 4
Max nTPM: 94.2
Min nTPM: 69.1
RHH5304_R3670
80.3
RHH5212_R3583
94.2
RHH5240_R3612
88.9
RHH5269_R3641
69.1
Memory CD4 T-cell Th2 nTPM: 50.3
Samples: 4
Max nTPM: 73.6
Min nTPM: 39.5
RHH5305_R3671
42.6
RHH5213_R3584
73.6
RHH5241_R3613
39.5
RHH5270_R3642
45.4
Naive CD4 T-cell nTPM: 23.3
Samples: 4
Max nTPM: 28.7
Min nTPM: 16.8
RHH5306_R3672
16.8
RHH5214_R3585
21.0
RHH5242_R3614
28.7
RHH5271_R3643
26.6
Naive CD8 T-cell nTPM: 78.7
Samples: 4
Max nTPM: 131.5
Min nTPM: 52.4
RHH5201_R3572
71.2
RHH5229_R3601
131.5
RHH5258_R3630
59.7
RHH5287_R3659
52.4
Non-Vd2 gdTCR nTPM: 448.9
Samples: 4
Max nTPM: 567.2
Min nTPM: 362.8
RHH5235_R3607
478.2
RHH5264_R3636
387.4
RHH5207_R3578
567.2
RHH5299_R3665
362.8
T-reg nTPM: 152.0
Samples: 4
Max nTPM: 165.3
Min nTPM: 128.9
RHH5301_R3667
128.9
RHH5237_R3609
150.6
RHH5266_R3638
163.2
RHH5209_R3580
165.3
Terminal effector memory CD4 T-cell nTPM: 216.6
Samples: 2
Max nTPM: 300.2
Min nTPM: 133.0
RHH5243_R3615
300.2
RHH5272_R3644
133.0
Terminal effector memory CD8 T-cell nTPM: 390.2
Samples: 4
Max nTPM: 465.3
Min nTPM: 331.1
RHH5232_R3604
420.5
RHH5204_R3575
344.0
RHH5261_R3633
465.3
RHH5296_R3662
331.1
Vd2 gdTCR nTPM: 333.7
Samples: 4
Max nTPM: 384.9
Min nTPM: 273.7
RHH5234_R3606
273.7
RHH5206_R3577
383.1
RHH5263_R3635
384.9
RHH5298_R3664
292.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
