HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:81.4 nTPM
HPA Brain:117.0 nTPM
GTEx:81.4 nTPM
FANTOM5:64.4 Scaled Tags Per Million
Pig:47.2 nTPM
Mouse:156.3 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050110Antibody CAB004293
Glial cells Not detectedHigh
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 117.0
Sample id Sample description nTPM
Hippocampus
nTPM: 107.3
2529 Female, age 94, left hemisphere 128.4
1898 Male, age 80, left hemisphere 114.6
2621 Female, age 67, right hemisphere 104.0
2148 Female, age 91, left hemisphere 101.2
1911 Female, age 85, right hemisphere 98.7
1855 Male, age 76, left hemisphere 96.8
Dentate gyrus
nTPM: 105.1
2530 Female, age 94, left hemisphere 120.4
1927 Female, age 91, both hemispheres 115.1
2531 Female, age 67, both hemispheres 104.5
2010 Male, age 76, both hemispheres 103.6
2246 Female, age 85, both hemispheres 95.7
2528 Male, age 74, both hemispheres 91.5
Entorhinal gyrus
nTPM: 116.3
2764 Male, age 80, right hemisphere 144.0
1938 Female, age 85, left hemisphere 116.4
2686 Male, age 75, right hemisphere 113.2
1787 Male, age 76, left hemisphere 112.4
2613 Female, age 94, left hemisphere 110.5
2117 Female, age 91, right hemisphere 101.4
Hippocampus, CA1
nTPM: 113.2
2749 Male, age 80, left hemisphere 151.8
2082 Female, age 91, right hemisphere 115.0
2045 Male, age 76, both hemispheres 105.6
1873 Female, age 85, both hemispheres 102.8
2527 Male, age 74, both hemispheres 90.7
Hippocampus, CA2
nTPM: 112.9
1892 Male, age 76, both hemispheres 125.2
1963 Male, age 80, left hemisphere 119.2
2437 Female, age 94, left hemisphere 115.8
1940 Female, age 85, left hemisphere 113.5
2113 Female, age 91, right hemisphere 110.6
2249 Male, age 74, both hemispheres 93.3
Hippocampus, CA3
nTPM: 109.6
2137 Male, age 80, left hemisphere 129.0
2620 Female, age 94, left hemisphere 128.8
1867 Male, age 76, both hemispheres 110.4
2861 Female, age 67, both hemispheres 107.6
1891 Female, age 85, both hemispheres 100.7
2436 Male, age 74, both hemispheres 81.2
Parahippocampal cortex
nTPM: 114.4
2532 Female, age 72, left hemisphere 122.8
1990 Female, age 91, right hemisphere 121.2
1850 Male, age 80, both hemispheres 120.9
1933 Female, age 85, both hemispheres 119.6
2245 Female, age 91, both hemispheres 115.5
2622 Female, age 67, right hemisphere 113.1
2018 Male, age 76, both hemispheres 109.2
2250 Female, age 67, right hemisphere 108.2
2692 Male, age 74, both hemispheres 107.8
2693 Female, age 94, both hemispheres 105.7
Perirhinal gyrus
nTPM: 117.0
1847 Female, age 91, left hemisphere 132.0
1794 Male, age 80, right hemisphere 123.6
1841 Female, age 85, right hemisphere 122.7
2848 Male, age 76, right hemisphere 110.0
2521 Female, age 94, right hemisphere 96.8
Subiculum
nTPM: 109.8
1977 Female, age 85, both hemispheres 127.4
1901 Male, age 80, both hemispheres 119.4
2042 Male, age 76, both hemispheres 116.6
2438 Female, age 94, left hemisphere 100.7
2619 Male, age 74, both hemispheres 100.5
2729 Female, age 91, right hemisphere 94.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.4
Samples: 197

Max nTPM: 221.9
Min nTPM: 38.2
Std nTPM: 24.8
Median nTPM: 79.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 221.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 166.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 149.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 141.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 137.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 130.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 123.1
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 121.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 121.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 119.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 119.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.4
FF:10169-103B7 60 years, female 67.5
FF:10153-102I9 76 years, female 61.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.2
Pig sample Sample description nTPM
Subiculum
nTPM: 36.2
Samples: 4

Max nTPM: 44.3
Min nTPM: 30.9
Sample A Female 44.3
Sample B Female 31.4
Sample C Male 38.0
Sample D Male 30.9
Dorsal hippocampus
nTPM: 44.7
Samples: 4

Max nTPM: 61.3
Min nTPM: 35.2
Sample A Female 61.3
Sample B Female 45.4
Sample C Male 35.2
Sample D Male 37.0
Entorhinal cortex
nTPM: 33.9
Samples: 4

Max nTPM: 38.2
Min nTPM: 30.6
Sample A Female 35.6
Sample B Female 30.6
Sample C Male 38.2
Sample D Male 31.0
Ventral hippocampus
nTPM: 47.2
Samples: 4

Max nTPM: 56.4
Min nTPM: 27.3
Sample A Female 49.4
Sample B Female 27.3
Sample C Male 56.4
Sample D Male 55.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 156.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 156.3
Samples: 4

Max nTPM: 195.1
Min nTPM: 139.7
Sample A Male 140.1
Sample B Male 150.4
Sample C Female 139.7
Sample D Female 195.1
Hippocampal formation
nTPM: 126.2
Samples: 4

Max nTPM: 135.7
Min nTPM: 121.1
Sample A Male 123.3
Sample B Male 121.1
Sample C Female 135.7
Sample D Female 124.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
2519 Antisense, RP_040324_01_B02, Mouse strain C57BL/6J (56 days, male) 19.8
2520 Antisense, RP_040324_01_B02, Mouse strain C57BL/6J (56 days, male) 17.5
887 Sense, RPS_Baylor_37031, Mouse strain C57BL/6J (56 days, male) 0.0

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