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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
171.6
nTPM
FANTOM5:
86.7
Scaled Tags Per Million
Pig:
42.2
nTPM
Allen mouse:
9.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
171.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 111.7
2188
Female, age 91, both hemispheres
125.9
2090
Male, age 80, both hemispheres
116.8
2301
Female, age 85, both hemispheres
105.8
1984
Male, age 76, both hemispheres
98.4
Dorsal cochlear nucleus nTPM: 111.8
2370
Male, age 61, both hemispheres
119.9
2802
Male, age 74, right hemisphere
118.3
2058
Male, age 76, both hemispheres
115.7
2187
Female, age 91, both hemispheres
110.1
2378
Male, age 80, both hemispheres
95.1
Dorsal tegmental nucleus nTPM: 107.6
2083
Male, age 80, both hemispheres
125.3
1936
Male, age 76, left hemisphere
104.4
2326
Male, age 74, both hemispheres
100.6
2358
Male, age 61, both hemispheres
100.3
Dorsolateral tegmental area nTPM: 105.8
2654
Male, age 80, both hemispheres
121.0
2141
Male, age 76, both hemispheres
108.9
2337
Male, age 61, both hemispheres
104.7
2751
Female, age 85, both hemispheres
103.1
2360
Male, age 74, both hemispheres
91.2
Kolliker-Fuse nucleus nTPM: 116.5
2793
Female, age 91, left hemisphere
134.0
2163
Male, age 80, both hemispheres
127.3
2315
Male, age 76, right hemisphere
88.1
Lateral lemniscal nuclei nTPM: 156.3
2036
Male, age 80, both hemispheres
168.9
2453
Male, age 74, right hemisphere
165.8
2169
Male, age 76, both hemispheres
157.9
2746
Female, age 85, left hemisphere
148.0
2320
Female, age 91, left hemisphere
140.9
Lateral parabrachial nucleus nTPM: 126.6
2139
Female, age 85, right hemisphere
150.7
2790
Male, age 61, both hemispheres
137.2
2013
Male, age 80, both hemispheres
128.1
2792
Male, age 76, both hemispheres
90.3
Lateral vestibular nucleus nTPM: 115.8
2184
Male, age 76, both hemispheres
129.3
2311
Male, age 80, both hemispheres
102.2
Locus coeruleus nTPM: 133.6
2014
Male, age 55, unknown
153.9
2123
Female, age 91, both hemispheres
139.7
2317
Female, age 72, unknown
137.3
1980
Male, age 76, both hemispheres
136.8
2162
Male, age 80, both hemispheres
128.1
2720
Male, age 74, both hemispheres
127.2
2788
Male, age 74, unknown
112.2
Medial parabrachial nucleus nTPM: 122.1
2156
Male, age 61, both hemispheres
139.7
2463
Female, age 85, right hemisphere
128.9
2854
Male, age 80, both hemispheres
117.9
2786
Male, age 76, both hemispheres
114.2
2170
Female, age 91, both hemispheres
110.1
Medial periolivary nuclei nTPM: 156.9
2171
Female, age 85, both hemispheres
188.9
2063
Male, age 76, both hemispheres
179.8
2791
Male, age 74, right hemisphere
145.1
2081
Male, age 80, both hemispheres
139.5
2458
Female, age 91, both hemispheres
131.1
Motor facial nucleus nTPM: 149.6
2062
Male, age 76, both hemispheres
190.8
2327
Male, age 80, both hemispheres
161.4
2365
Male, age 74, right hemisphere
149.7
2697
Female, age 85, both hemispheres
136.1
2126
Male, age 61, both hemispheres
130.6
2795
Female, age 91, both hemispheres
129.1
Motor trigeminal nucleus nTPM: 143.8
2079
Male, age 80, both hemispheres
170.1
2560
Male, age 74, both hemispheres
158.2
2335
Male, age 61, both hemispheres
141.3
2321
Female, age 91, both hemispheres
131.3
2309
Male, age 76, both hemispheres
118.0
Nuclei of the trapezoid body nTPM: 164.1
2735
Female, age 85, both hemispheres
198.6
1983
Male, age 76, both hemispheres
173.8
2159
Male, age 61, both hemispheres
161.8
2166
Male, age 80, both hemispheres
154.4
2368
Female, age 91, both hemispheres
131.9
Nucleus raphe magnus nTPM: 165.9
2172
Female, age 85, both hemispheres
201.8
2160
Male, age 61, both hemispheres
186.7
2455
Male, age 74, both hemispheres
159.7
2328
Male, age 80, both hemispheres
152.5
2051
Male, age 76, both hemispheres
151.5
2459
Female, age 91, both hemispheres
143.1
Paramedian reticular nucleus nTPM: 130.1
2050
Female, age 85, both hemispheres
159.7
2057
Male, age 80, both hemispheres
136.8
2313
Male, age 61, both hemispheres
129.7
2052
Male, age 76, both hemispheres
94.3
Pedunculopontine tegmental nucleus nTPM: 111.1
2334
Male, age 80, both hemispheres
120.8
2338
Male, age 61, both hemispheres
107.6
1921
Female, age 85, both hemispheres
104.9
Pontine nuclei nTPM: 171.6
2787
Female, age 85, both hemispheres
209.3
1863
Male, age 55, unknown
201.3
2109
Female, age 72, unknown
179.5
2727
Male, age 61, right hemisphere
175.1
1968
Male, age 76, left hemisphere
173.4
2115
Male, age 80, left hemisphere
153.3
2454
Male, age 74, left hemisphere
148.2
2319
Female, age 91, both hemispheres
132.4
Pontine raphe nucleus nTPM: 134.1
2122
Female, age 85, midline
159.2
2853
Male, age 76, midline
108.9
Posteroventral cochlear nucleus nTPM: 119.2
2752
Female, age 85, both hemispheres
133.3
2135
Female, age 91, both hemispheres
128.9
2371
Male, age 61, both hemispheres
124.7
2070
Male, age 76, both hemispheres
118.8
2341
Male, age 80, both hemispheres
90.5
Principal sensory trigeminal nucleus nTPM: 150.1
2158
Male, age 61, both hemispheres
179.5
2008
Male, age 80, left hemisphere
173.4
2367
Female, age 91, left hemisphere
136.4
2324
Male, age 76, both hemispheres
111.1
Reticular pontine nucleus, caudal nTPM: 143.4
2332
Male, age 80, right hemisphere
171.9
2092
Male, age 76, both hemispheres
140.0
2457
Female, age 91, both hemispheres
130.9
2559
Male, age 74, both hemispheres
130.9
Reticular pontine nucleus, oral nTPM: 127.5
2361
Male, age 74, both hemispheres
154.4
2012
Female, age 85, both hemispheres
142.6
2366
Female, age 91, both hemispheres
129.5
1939
Male, age 80, both hemispheres
110.0
2167
Male, age 76, both hemispheres
100.8
Reticulotegmental nucleus nTPM: 130.9
2452
Male, age 74, both hemispheres
141.8
2325
Male, age 76, both hemispheres
138.1
2333
Male, age 80, both hemispheres
130.6
2322
Female, age 91, both hemispheres
113.0
Spinal trigeminal nucleus, oral nTPM: 114.3
2164
Male, age 80, both hemispheres
124.3
2737
Female, age 85, both hemispheres
110.3
1978
Male, age 76, both hemispheres
108.3
Subcoeruleus area nTPM: 127.7
2089
Male, age 76, left hemisphere
154.0
1958
Male, age 80, both hemispheres
129.9
2323
Female, age 91, left hemisphere
128.5
2451
Male, age 74, both hemispheres
125.6
2369
Female, age 85, left hemisphere
100.6
Superior olive nTPM: 146.6
1875
Female, age 85, both hemispheres
171.7
2329
Male, age 80, right hemisphere
151.1
2020
Male, age 76, both hemispheres
140.8
2561
Female, age 91, both hemispheres
136.9
2364
Male, age 74, right hemisphere
132.2
Ventral periolivary nuclei nTPM: 156.5
2130
Female, age 85, both hemispheres
177.3
2165
Male, age 80, both hemispheres
169.4
2794
Female, age 91, left hemisphere
142.3
2023
Male, age 76, both hemispheres
136.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 133.0
2449
Male, age 74, both hemispheres
161.1
1959
Male, age 76, both hemispheres
142.8
2161
Male, age 80, both hemispheres
139.3
2456
Female, age 91, both hemispheres
135.9
2840
Female, age 85, both hemispheres
113.7
2359
Male, age 61, both hemispheres
105.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
42.2
Pig sample
Sample description
nTPM
Pons nTPM: 42.2
Samples: 4
Max nTPM: 46.5
Min nTPM: 40.1
Sample A
Female
40.1
Sample B
Female
41.0
Sample C
Male
46.5
Sample D
Male
41.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
