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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
48.0
nTPM
Monaco:
60.8
nTPM
Schmiedel:
200.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
48.0
HPA sample
nTPM
gdT-cell nTPM: 36.1
Samples: 6
Max nTPM: 44.4
Min nTPM: 32.3
P10809_1007
32.3
P10809_1022
44.4
P10809_1041
33.8
P10809_1060
34.3
P10809_1077
35.5
P10809_1098
36.0
MAIT T-cell nTPM: 47.3
Samples: 6
Max nTPM: 64.9
Min nTPM: 33.5
P10809_1006
33.5
P10809_1024
64.9
P10809_1043
56.1
P10809_1062
49.4
P10809_1083
45.1
P10809_1097
34.9
Memory CD4 T-cell nTPM: 41.2
Samples: 6
Max nTPM: 57.4
Min nTPM: 26.2
P10809_1014
26.2
P10809_1026
33.6
P10809_1045
42.6
P10809_1064
42.3
P10809_1086
57.4
P10809_1113
45.0
Memory CD8 T-cell nTPM: 45.6
Samples: 5
Max nTPM: 51.7
Min nTPM: 28.1
P10809_1012
28.1
P10809_1027
51.3
P10809_1046
46.6
P10809_1065
51.7
P10809_1111
50.2
Naive CD4 T-cell nTPM: 40.3
Samples: 6
Max nTPM: 44.3
Min nTPM: 32.3
P10809_1015
37.4
P10809_1030
32.3
P10809_1049
44.3
P10809_1068
44.3
P10809_1085
40.0
P10809_1112
43.4
Naive CD8 T-cell nTPM: 39.6
Samples: 6
Max nTPM: 52.4
Min nTPM: 23.0
P10809_1016
38.5
P10809_1031
23.0
P10809_1050
41.0
P10809_1069
44.9
P10809_1087
52.4
P10809_1110
37.8
T-reg nTPM: 48.0
Samples: 6
Max nTPM: 74.8
Min nTPM: 24.6
P10809_1018
32.6
P10809_1037
45.8
P10809_1056
24.6
P10809_1075
74.8
P10809_1094
50.6
P10809_1106
59.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
60.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 44.1
Samples: 4
Max nTPM: 62.2
Min nTPM: 29.3
RHH5202_R3573
62.2
RHH5230_R3602
30.0
RHH5259_R3631
29.3
RHH5288_R3660
54.8
Effector memory CD8 T-cell nTPM: 53.0
Samples: 4
Max nTPM: 87.3
Min nTPM: 22.7
RHH5203_R3574
87.3
RHH5231_R3603
46.5
RHH5260_R3632
22.7
RHH5289_R3661
55.4
MAIT T-cell nTPM: 50.8
Samples: 4
Max nTPM: 62.1
Min nTPM: 39.9
RHH5233_R3605
56.9
RHH5205_R3576
44.1
RHH5262_R3634
39.9
RHH5297_R3663
62.1
Memory CD4 T-cell TFH nTPM: 60.9
Samples: 4
Max nTPM: 78.0
Min nTPM: 37.8
RHH5300_R3666
68.7
RHH5236_R3608
78.0
RHH5265_R3637
37.8
RHH5208_R3579
58.9
Memory CD4 T-cell Th1 nTPM: 48.5
Samples: 4
Max nTPM: 78.0
Min nTPM: 21.6
RHH5210_R3581
55.5
RHH5302_R3668
78.0
RHH5238_R3610
21.6
RHH5267_R3639
38.9
Memory CD4 T-cell Th1/Th17 nTPM: 50.9
Samples: 4
Max nTPM: 88.2
Min nTPM: 24.8
RHH5303_R3669
88.2
RHH5211_R3582
48.8
RHH5239_R3611
24.8
RHH5268_R3640
41.9
Memory CD4 T-cell Th17 nTPM: 33.3
Samples: 4
Max nTPM: 50.0
Min nTPM: 15.0
RHH5304_R3670
43.3
RHH5212_R3583
50.0
RHH5240_R3612
15.0
RHH5269_R3641
25.0
Memory CD4 T-cell Th2 nTPM: 50.3
Samples: 4
Max nTPM: 71.1
Min nTPM: 37.7
RHH5305_R3671
44.4
RHH5213_R3584
47.9
RHH5241_R3613
71.1
RHH5270_R3642
37.7
Naive CD4 T-cell nTPM: 40.8
Samples: 4
Max nTPM: 71.8
Min nTPM: 19.4
RHH5306_R3672
44.1
RHH5214_R3585
71.8
RHH5242_R3614
28.0
RHH5271_R3643
19.4
Naive CD8 T-cell nTPM: 44.1
Samples: 4
Max nTPM: 70.7
Min nTPM: 17.7
RHH5201_R3572
70.7
RHH5229_R3601
17.7
RHH5258_R3630
48.7
RHH5287_R3659
39.3
Non-Vd2 gdTCR nTPM: 48.9
Samples: 4
Max nTPM: 71.9
Min nTPM: 29.8
RHH5235_R3607
29.8
RHH5264_R3636
37.3
RHH5207_R3578
56.5
RHH5299_R3665
71.9
T-reg nTPM: 43.7
Samples: 4
Max nTPM: 60.8
Min nTPM: 28.2
RHH5301_R3667
60.8
RHH5237_R3609
40.5
RHH5266_R3638
28.2
RHH5209_R3580
45.2
Terminal effector memory CD4 T-cell nTPM: 36.2
Samples: 2
Max nTPM: 45.2
Min nTPM: 27.1
RHH5243_R3615
27.1
RHH5272_R3644
45.2
Terminal effector memory CD8 T-cell nTPM: 54.6
Samples: 4
Max nTPM: 77.8
Min nTPM: 25.5
RHH5232_R3604
50.3
RHH5204_R3575
77.8
RHH5261_R3633
25.5
RHH5296_R3662
64.8
Vd2 gdTCR nTPM: 49.7
Samples: 4
Max nTPM: 68.8
Min nTPM: 19.2
RHH5234_R3606
48.1
RHH5206_R3577
68.8
RHH5263_R3635
19.2
RHH5298_R3664
62.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
