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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.6
nTPM
Monaco:
47.7
nTPM
Schmiedel:
28.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.6
HPA sample
nTPM
gdT-cell nTPM: 27.7
Samples: 6
Max nTPM: 57.1
Min nTPM: 18.4
P10809_1007
23.8
P10809_1022
24.6
P10809_1041
57.1
P10809_1060
18.7
P10809_1077
18.4
P10809_1098
23.8
MAIT T-cell nTPM: 22.4
Samples: 6
Max nTPM: 35.1
Min nTPM: 8.4
P10809_1006
18.5
P10809_1024
16.1
P10809_1043
35.1
P10809_1062
21.1
P10809_1083
35.0
P10809_1097
8.4
Memory CD4 T-cell nTPM: 27.7
Samples: 6
Max nTPM: 36.9
Min nTPM: 19.1
P10809_1014
26.0
P10809_1026
36.9
P10809_1045
32.1
P10809_1064
19.1
P10809_1086
23.6
P10809_1113
28.7
Memory CD8 T-cell nTPM: 22.8
Samples: 5
Max nTPM: 27.0
Min nTPM: 15.4
P10809_1012
21.4
P10809_1027
15.4
P10809_1046
27.0
P10809_1065
24.0
P10809_1111
26.2
Naive CD4 T-cell nTPM: 29.5
Samples: 6
Max nTPM: 37.6
Min nTPM: 23.0
P10809_1015
23.0
P10809_1030
31.4
P10809_1049
37.6
P10809_1068
25.9
P10809_1085
31.7
P10809_1112
27.2
Naive CD8 T-cell nTPM: 21.2
Samples: 6
Max nTPM: 24.9
Min nTPM: 18.2
P10809_1016
22.4
P10809_1031
19.5
P10809_1050
22.4
P10809_1069
24.9
P10809_1087
18.2
P10809_1110
19.9
T-reg nTPM: 49.6
Samples: 6
Max nTPM: 63.1
Min nTPM: 31.0
P10809_1018
47.0
P10809_1037
49.1
P10809_1056
63.1
P10809_1075
44.9
P10809_1094
62.4
P10809_1106
31.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 29.9
Samples: 4
Max nTPM: 43.3
Min nTPM: 14.8
RHH5202_R3573
43.3
RHH5230_R3602
26.8
RHH5259_R3631
14.8
RHH5288_R3660
34.7
Effector memory CD8 T-cell nTPM: 26.9
Samples: 4
Max nTPM: 36.1
Min nTPM: 20.7
RHH5203_R3574
27.1
RHH5231_R3603
36.1
RHH5260_R3632
20.7
RHH5289_R3661
23.7
MAIT T-cell nTPM: 29.4
Samples: 4
Max nTPM: 37.9
Min nTPM: 21.3
RHH5233_R3605
26.5
RHH5205_R3576
21.3
RHH5262_R3634
37.9
RHH5297_R3663
31.8
Memory CD4 T-cell TFH nTPM: 47.7
Samples: 4
Max nTPM: 58.4
Min nTPM: 39.5
RHH5300_R3666
50.7
RHH5236_R3608
39.5
RHH5265_R3637
58.4
RHH5208_R3579
42.1
Memory CD4 T-cell Th1 nTPM: 32.8
Samples: 4
Max nTPM: 38.5
Min nTPM: 28.0
RHH5210_R3581
38.5
RHH5302_R3668
35.6
RHH5238_R3610
28.0
RHH5267_R3639
29.2
Memory CD4 T-cell Th1/Th17 nTPM: 37.0
Samples: 4
Max nTPM: 45.9
Min nTPM: 24.2
RHH5303_R3669
40.8
RHH5211_R3582
45.9
RHH5239_R3611
24.2
RHH5268_R3640
36.9
Memory CD4 T-cell Th17 nTPM: 36.1
Samples: 4
Max nTPM: 65.4
Min nTPM: 21.2
RHH5304_R3670
30.1
RHH5212_R3583
65.4
RHH5240_R3612
27.7
RHH5269_R3641
21.2
Memory CD4 T-cell Th2 nTPM: 42.4
Samples: 4
Max nTPM: 54.6
Min nTPM: 35.0
RHH5305_R3671
36.6
RHH5213_R3584
43.2
RHH5241_R3613
54.6
RHH5270_R3642
35.0
Naive CD4 T-cell nTPM: 35.2
Samples: 4
Max nTPM: 41.6
Min nTPM: 27.3
RHH5306_R3672
39.9
RHH5214_R3585
41.6
RHH5242_R3614
32.1
RHH5271_R3643
27.3
Naive CD8 T-cell nTPM: 28.0
Samples: 4
Max nTPM: 38.1
Min nTPM: 14.6
RHH5201_R3572
38.1
RHH5229_R3601
14.6
RHH5258_R3630
33.7
RHH5287_R3659
25.5
Non-Vd2 gdTCR nTPM: 36.1
Samples: 4
Max nTPM: 46.0
Min nTPM: 18.6
RHH5235_R3607
18.6
RHH5264_R3636
37.2
RHH5207_R3578
42.7
RHH5299_R3665
46.0
T-reg nTPM: 45.4
Samples: 4
Max nTPM: 57.2
Min nTPM: 34.2
RHH5301_R3667
45.6
RHH5237_R3609
57.2
RHH5266_R3638
34.2
RHH5209_R3580
44.5
Terminal effector memory CD4 T-cell nTPM: 38.9
Samples: 2
Max nTPM: 57.9
Min nTPM: 19.9
RHH5243_R3615
19.9
RHH5272_R3644
57.9
Terminal effector memory CD8 T-cell nTPM: 35.9
Samples: 4
Max nTPM: 44.6
Min nTPM: 21.2
RHH5232_R3604
40.1
RHH5204_R3575
37.5
RHH5261_R3633
21.2
RHH5296_R3662
44.6
Vd2 gdTCR nTPM: 26.9
Samples: 4
Max nTPM: 32.0
Min nTPM: 17.1
RHH5234_R3606
32.0
RHH5206_R3577
26.9
RHH5263_R3635
17.1
RHH5298_R3664
31.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
