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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1336.8
nTPM
Monaco:
2044.6
nTPM
Schmiedel:
20.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1336.8
HPA sample
nTPM
gdT-cell nTPM: 1336.8
Samples: 6
Max nTPM: 1801.8
Min nTPM: 642.9
P10809_1007
941.5
P10809_1022
1801.8
P10809_1041
1732.0
P10809_1060
1197.9
P10809_1077
1704.9
P10809_1098
642.9
MAIT T-cell nTPM: 16.0
Samples: 6
Max nTPM: 45.9
Min nTPM: 4.1
P10809_1006
6.5
P10809_1024
4.1
P10809_1043
12.3
P10809_1062
9.9
P10809_1083
45.9
P10809_1097
17.1
Memory CD4 T-cell nTPM: 95.3
Samples: 6
Max nTPM: 297.1
Min nTPM: 2.2
P10809_1014
7.9
P10809_1026
2.2
P10809_1045
29.3
P10809_1064
232.3
P10809_1086
297.1
P10809_1113
2.9
Memory CD8 T-cell nTPM: 639.8
Samples: 5
Max nTPM: 1132.1
Min nTPM: 202.8
P10809_1012
238.9
P10809_1027
873.6
P10809_1046
751.6
P10809_1065
1132.1
P10809_1111
202.8
Naive CD4 T-cell nTPM: 29.1
Samples: 6
Max nTPM: 121.2
Min nTPM: 0.8
P10809_1015
9.5
P10809_1030
0.8
P10809_1049
17.0
P10809_1068
24.7
P10809_1085
121.2
P10809_1112
1.2
Naive CD8 T-cell nTPM: 607.5
Samples: 6
Max nTPM: 1180.9
Min nTPM: 66.5
P10809_1016
66.5
P10809_1031
595.7
P10809_1050
712.8
P10809_1069
942.9
P10809_1087
1180.9
P10809_1110
146.4
T-reg nTPM: 2.7
Samples: 6
Max nTPM: 7.4
Min nTPM: 0.3
P10809_1018
0.8
P10809_1037
1.1
P10809_1056
0.3
P10809_1075
1.7
P10809_1094
7.4
P10809_1106
5.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2044.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.9
Samples: 4
Max nTPM: 29.8
Min nTPM: 1.9
RHH5202_R3573
2.3
RHH5230_R3602
5.5
RHH5259_R3631
1.9
RHH5288_R3660
29.8
Effector memory CD8 T-cell nTPM: 841.1
Samples: 4
Max nTPM: 1149.1
Min nTPM: 630.9
RHH5203_R3574
744.8
RHH5231_R3603
1149.1
RHH5260_R3632
630.9
RHH5289_R3661
839.6
MAIT T-cell nTPM: 31.6
Samples: 4
Max nTPM: 77.3
Min nTPM: 6.6
RHH5233_R3605
20.4
RHH5205_R3576
77.3
RHH5262_R3634
22.1
RHH5297_R3663
6.6
Memory CD4 T-cell TFH nTPM: 18.8
Samples: 4
Max nTPM: 51.0
Min nTPM: 6.1
RHH5300_R3666
7.8
RHH5236_R3608
10.2
RHH5265_R3637
6.1
RHH5208_R3579
51.0
Memory CD4 T-cell Th1 nTPM: 33.0
Samples: 4
Max nTPM: 59.1
Min nTPM: 17.3
RHH5210_R3581
34.5
RHH5302_R3668
21.1
RHH5238_R3610
59.1
RHH5267_R3639
17.3
Memory CD4 T-cell Th1/Th17 nTPM: 18.8
Samples: 4
Max nTPM: 43.7
Min nTPM: 8.9
RHH5303_R3669
13.3
RHH5211_R3582
43.7
RHH5239_R3611
9.2
RHH5268_R3640
8.9
Memory CD4 T-cell Th17 nTPM: 18.7
Samples: 4
Max nTPM: 45.3
Min nTPM: 5.8
RHH5304_R3670
5.8
RHH5212_R3583
45.3
RHH5240_R3612
11.6
RHH5269_R3641
12.2
Memory CD4 T-cell Th2 nTPM: 14.8
Samples: 4
Max nTPM: 25.0
Min nTPM: 6.9
RHH5305_R3671
6.9
RHH5213_R3584
25.0
RHH5241_R3613
19.5
RHH5270_R3642
7.7
Naive CD4 T-cell nTPM: 32.5
Samples: 4
Max nTPM: 69.3
Min nTPM: 9.8
RHH5306_R3672
14.6
RHH5214_R3585
69.3
RHH5242_R3614
36.2
RHH5271_R3643
9.8
Naive CD8 T-cell nTPM: 2.6
Samples: 4
Max nTPM: 4.9
Min nTPM: 0.0
RHH5201_R3572
1.6
RHH5229_R3601
4.9
RHH5258_R3630
3.7
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 1976.0
Samples: 4
Max nTPM: 2896.2
Min nTPM: 906.1
RHH5235_R3607
906.1
RHH5264_R3636
1951.7
RHH5207_R3578
2896.2
RHH5299_R3665
2149.9
T-reg nTPM: 20.0
Samples: 4
Max nTPM: 29.9
Min nTPM: 11.2
RHH5301_R3667
20.1
RHH5237_R3609
18.7
RHH5266_R3638
11.2
RHH5209_R3580
29.9
Terminal effector memory CD4 T-cell nTPM: 799.6
Samples: 2
Max nTPM: 829.5
Min nTPM: 769.6
RHH5243_R3615
769.6
RHH5272_R3644
829.5
Terminal effector memory CD8 T-cell nTPM: 2044.7
Samples: 4
Max nTPM: 2978.8
Min nTPM: 1349.0
RHH5232_R3604
1349.0
RHH5204_R3575
2978.8
RHH5261_R3633
2023.4
RHH5296_R3662
1827.5
Vd2 gdTCR nTPM: 1249.7
Samples: 4
Max nTPM: 3718.8
Min nTPM: 294.4
RHH5234_R3606
294.4
RHH5206_R3577
3718.8
RHH5263_R3635
571.9
RHH5298_R3664
413.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
