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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
37.3
nTPM
Monaco:
128.9
nTPM
Schmiedel:
34.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
37.3
HPA sample
nTPM
gdT-cell nTPM: 37.3
Samples: 6
Max nTPM: 56.0
Min nTPM: 28.1
P10809_1007
32.0
P10809_1022
38.4
P10809_1041
56.0
P10809_1060
40.6
P10809_1077
28.5
P10809_1098
28.1
MAIT T-cell nTPM: 25.2
Samples: 6
Max nTPM: 34.3
Min nTPM: 14.4
P10809_1006
34.3
P10809_1024
25.5
P10809_1043
24.6
P10809_1062
31.9
P10809_1083
20.3
P10809_1097
14.4
Memory CD4 T-cell nTPM: 26.5
Samples: 6
Max nTPM: 34.8
Min nTPM: 21.5
P10809_1014
24.1
P10809_1026
34.8
P10809_1045
29.3
P10809_1064
24.1
P10809_1086
21.5
P10809_1113
25.0
Memory CD8 T-cell nTPM: 32.2
Samples: 5
Max nTPM: 40.3
Min nTPM: 28.8
P10809_1012
30.0
P10809_1027
40.3
P10809_1046
28.8
P10809_1065
33.1
P10809_1111
28.9
Naive CD4 T-cell nTPM: 31.7
Samples: 6
Max nTPM: 39.6
Min nTPM: 21.7
P10809_1015
31.7
P10809_1030
21.7
P10809_1049
37.5
P10809_1068
39.6
P10809_1085
27.6
P10809_1112
31.9
Naive CD8 T-cell nTPM: 28.4
Samples: 6
Max nTPM: 35.3
Min nTPM: 18.2
P10809_1016
32.5
P10809_1031
25.0
P10809_1050
34.6
P10809_1069
35.3
P10809_1087
24.7
P10809_1110
18.2
T-reg nTPM: 30.1
Samples: 6
Max nTPM: 41.2
Min nTPM: 23.1
P10809_1018
23.1
P10809_1037
28.4
P10809_1056
41.2
P10809_1075
25.6
P10809_1094
25.9
P10809_1106
36.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
128.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 79.7
Samples: 4
Max nTPM: 92.3
Min nTPM: 67.1
RHH5202_R3573
67.1
RHH5230_R3602
82.5
RHH5259_R3631
92.3
RHH5288_R3660
76.8
Effector memory CD8 T-cell nTPM: 97.3
Samples: 4
Max nTPM: 128.8
Min nTPM: 74.6
RHH5203_R3574
103.2
RHH5231_R3603
82.7
RHH5260_R3632
128.8
RHH5289_R3661
74.6
MAIT T-cell nTPM: 94.9
Samples: 4
Max nTPM: 111.0
Min nTPM: 79.5
RHH5233_R3605
95.7
RHH5205_R3576
111.0
RHH5262_R3634
93.5
RHH5297_R3663
79.5
Memory CD4 T-cell TFH nTPM: 86.1
Samples: 4
Max nTPM: 113.2
Min nTPM: 62.3
RHH5300_R3666
83.4
RHH5236_R3608
62.3
RHH5265_R3637
113.2
RHH5208_R3579
85.5
Memory CD4 T-cell Th1 nTPM: 100.3
Samples: 4
Max nTPM: 109.0
Min nTPM: 84.7
RHH5210_R3581
109.0
RHH5302_R3668
84.7
RHH5238_R3610
108.6
RHH5267_R3639
99.0
Memory CD4 T-cell Th1/Th17 nTPM: 80.1
Samples: 4
Max nTPM: 99.6
Min nTPM: 71.6
RHH5303_R3669
71.6
RHH5211_R3582
73.0
RHH5239_R3611
99.6
RHH5268_R3640
76.1
Memory CD4 T-cell Th17 nTPM: 86.6
Samples: 4
Max nTPM: 101.7
Min nTPM: 74.4
RHH5304_R3670
85.1
RHH5212_R3583
74.4
RHH5240_R3612
101.7
RHH5269_R3641
85.1
Memory CD4 T-cell Th2 nTPM: 91.0
Samples: 4
Max nTPM: 99.1
Min nTPM: 72.5
RHH5305_R3671
99.1
RHH5213_R3584
96.2
RHH5241_R3613
72.5
RHH5270_R3642
96.0
Naive CD4 T-cell nTPM: 109.8
Samples: 4
Max nTPM: 123.8
Min nTPM: 96.4
RHH5306_R3672
96.4
RHH5214_R3585
110.6
RHH5242_R3614
108.2
RHH5271_R3643
123.8
Naive CD8 T-cell nTPM: 107.3
Samples: 4
Max nTPM: 121.0
Min nTPM: 84.3
RHH5201_R3572
118.4
RHH5229_R3601
121.0
RHH5258_R3630
105.5
RHH5287_R3659
84.3
Non-Vd2 gdTCR nTPM: 103.8
Samples: 4
Max nTPM: 122.1
Min nTPM: 75.4
RHH5235_R3607
111.8
RHH5264_R3636
122.1
RHH5207_R3578
105.9
RHH5299_R3665
75.4
T-reg nTPM: 100.2
Samples: 4
Max nTPM: 111.5
Min nTPM: 90.4
RHH5301_R3667
106.4
RHH5237_R3609
90.4
RHH5266_R3638
111.5
RHH5209_R3580
92.3
Terminal effector memory CD4 T-cell nTPM: 129.0
Samples: 2
Max nTPM: 136.2
Min nTPM: 121.7
RHH5243_R3615
136.2
RHH5272_R3644
121.7
Terminal effector memory CD8 T-cell nTPM: 107.5
Samples: 4
Max nTPM: 122.3
Min nTPM: 91.3
RHH5232_R3604
122.3
RHH5204_R3575
91.3
RHH5261_R3633
117.4
RHH5296_R3662
99.1
Vd2 gdTCR nTPM: 99.1
Samples: 4
Max nTPM: 123.0
Min nTPM: 86.1
RHH5234_R3606
86.7
RHH5206_R3577
100.7
RHH5263_R3635
123.0
RHH5298_R3664
86.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
