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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
12.4
nTPM
Monaco:
24.4
nTPM
Schmiedel:
102.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.4
HPA sample
nTPM
gdT-cell nTPM: 9.3
Samples: 6
Max nTPM: 10.7
Min nTPM: 8.1
P10809_1007
8.7
P10809_1022
10.7
P10809_1041
9.0
P10809_1060
10.0
P10809_1077
9.2
P10809_1098
8.1
MAIT T-cell nTPM: 10.9
Samples: 6
Max nTPM: 17.9
Min nTPM: 5.8
P10809_1006
7.8
P10809_1024
10.9
P10809_1043
10.4
P10809_1062
17.9
P10809_1083
5.8
P10809_1097
12.7
Memory CD4 T-cell nTPM: 9.1
Samples: 6
Max nTPM: 10.6
Min nTPM: 7.4
P10809_1014
7.6
P10809_1026
7.4
P10809_1045
9.2
P10809_1064
9.8
P10809_1086
10.6
P10809_1113
10.1
Memory CD8 T-cell nTPM: 11.5
Samples: 5
Max nTPM: 14.6
Min nTPM: 9.0
P10809_1012
9.7
P10809_1027
13.5
P10809_1046
10.9
P10809_1065
14.6
P10809_1111
9.0
Naive CD4 T-cell nTPM: 11.2
Samples: 6
Max nTPM: 14.5
Min nTPM: 7.3
P10809_1015
10.4
P10809_1030
9.5
P10809_1049
14.5
P10809_1068
14.4
P10809_1085
7.3
P10809_1112
11.3
Naive CD8 T-cell nTPM: 12.4
Samples: 6
Max nTPM: 15.1
Min nTPM: 10.5
P10809_1016
10.8
P10809_1031
10.5
P10809_1050
14.4
P10809_1069
15.1
P10809_1087
10.7
P10809_1110
13.0
T-reg nTPM: 7.9
Samples: 6
Max nTPM: 13.3
Min nTPM: 0.3
P10809_1018
9.5
P10809_1037
6.8
P10809_1056
0.3
P10809_1075
11.3
P10809_1094
6.0
P10809_1106
13.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 19.8
Samples: 4
Max nTPM: 39.6
Min nTPM: 6.1
RHH5202_R3573
17.8
RHH5230_R3602
15.5
RHH5259_R3631
6.1
RHH5288_R3660
39.6
Effector memory CD8 T-cell nTPM: 18.1
Samples: 4
Max nTPM: 34.0
Min nTPM: 3.6
RHH5203_R3574
34.0
RHH5231_R3603
16.4
RHH5260_R3632
18.4
RHH5289_R3661
3.6
MAIT T-cell nTPM: 16.7
Samples: 4
Max nTPM: 30.5
Min nTPM: 1.7
RHH5233_R3605
1.7
RHH5205_R3576
21.5
RHH5262_R3634
30.5
RHH5297_R3663
12.9
Memory CD4 T-cell TFH nTPM: 19.8
Samples: 4
Max nTPM: 30.4
Min nTPM: 12.3
RHH5300_R3666
19.2
RHH5236_R3608
12.3
RHH5265_R3637
17.4
RHH5208_R3579
30.4
Memory CD4 T-cell Th1 nTPM: 13.9
Samples: 4
Max nTPM: 16.8
Min nTPM: 9.7
RHH5210_R3581
16.8
RHH5302_R3668
16.2
RHH5238_R3610
9.7
RHH5267_R3639
12.8
Memory CD4 T-cell Th1/Th17 nTPM: 15.7
Samples: 4
Max nTPM: 21.7
Min nTPM: 5.4
RHH5303_R3669
21.7
RHH5211_R3582
20.4
RHH5239_R3611
5.4
RHH5268_R3640
15.2
Memory CD4 T-cell Th17 nTPM: 17.5
Samples: 4
Max nTPM: 27.1
Min nTPM: 8.6
RHH5304_R3670
8.6
RHH5212_R3583
19.4
RHH5240_R3612
14.8
RHH5269_R3641
27.1
Memory CD4 T-cell Th2 nTPM: 23.6
Samples: 4
Max nTPM: 28.9
Min nTPM: 16.3
RHH5305_R3671
22.8
RHH5213_R3584
16.3
RHH5241_R3613
26.5
RHH5270_R3642
28.9
Naive CD4 T-cell nTPM: 18.1
Samples: 4
Max nTPM: 22.4
Min nTPM: 15.1
RHH5306_R3672
18.2
RHH5214_R3585
22.4
RHH5242_R3614
16.8
RHH5271_R3643
15.1
Naive CD8 T-cell nTPM: 12.4
Samples: 4
Max nTPM: 25.8
Min nTPM: 0.0
RHH5201_R3572
7.7
RHH5229_R3601
0.0
RHH5258_R3630
25.8
RHH5287_R3659
16.0
Non-Vd2 gdTCR nTPM: 16.6
Samples: 4
Max nTPM: 32.3
Min nTPM: 7.1
RHH5235_R3607
10.1
RHH5264_R3636
32.3
RHH5207_R3578
16.7
RHH5299_R3665
7.1
T-reg nTPM: 17.2
Samples: 4
Max nTPM: 24.4
Min nTPM: 7.4
RHH5301_R3667
24.4
RHH5237_R3609
7.4
RHH5266_R3638
14.3
RHH5209_R3580
22.7
Terminal effector memory CD4 T-cell nTPM: 22.8
Samples: 2
Max nTPM: 23.1
Min nTPM: 22.4
RHH5243_R3615
22.4
RHH5272_R3644
23.1
Terminal effector memory CD8 T-cell nTPM: 21.5
Samples: 4
Max nTPM: 39.2
Min nTPM: 10.3
RHH5232_R3604
20.9
RHH5204_R3575
15.7
RHH5261_R3633
10.3
RHH5296_R3662
39.2
Vd2 gdTCR nTPM: 24.4
Samples: 4
Max nTPM: 32.0
Min nTPM: 17.2
RHH5234_R3606
28.1
RHH5206_R3577
17.2
RHH5263_R3635
32.0
RHH5298_R3664
20.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
