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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
85.6
nTPM
Monaco:
127.6
nTPM
Schmiedel:
55.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.6
HPA sample
nTPM
gdT-cell nTPM: 51.3
Samples: 6
Max nTPM: 67.8
Min nTPM: 39.6
P10809_1007
39.6
P10809_1022
67.8
P10809_1041
43.4
P10809_1060
48.2
P10809_1077
61.4
P10809_1098
47.6
MAIT T-cell nTPM: 59.7
Samples: 6
Max nTPM: 73.6
Min nTPM: 49.3
P10809_1006
53.7
P10809_1024
73.6
P10809_1043
49.3
P10809_1062
57.5
P10809_1083
61.3
P10809_1097
62.6
Memory CD4 T-cell nTPM: 62.9
Samples: 6
Max nTPM: 74.0
Min nTPM: 57.9
P10809_1014
61.5
P10809_1026
61.5
P10809_1045
59.9
P10809_1064
57.9
P10809_1086
74.0
P10809_1113
62.7
Memory CD8 T-cell nTPM: 56.4
Samples: 5
Max nTPM: 68.8
Min nTPM: 45.5
P10809_1012
55.1
P10809_1027
68.8
P10809_1046
45.5
P10809_1065
53.2
P10809_1111
59.2
Naive CD4 T-cell nTPM: 59.8
Samples: 6
Max nTPM: 63.2
Min nTPM: 54.7
P10809_1015
58.8
P10809_1030
63.2
P10809_1049
62.2
P10809_1068
54.7
P10809_1085
61.6
P10809_1112
58.0
Naive CD8 T-cell nTPM: 59.1
Samples: 6
Max nTPM: 67.8
Min nTPM: 53.3
P10809_1016
56.2
P10809_1031
66.3
P10809_1050
55.6
P10809_1069
55.6
P10809_1087
67.8
P10809_1110
53.3
T-reg nTPM: 85.7
Samples: 6
Max nTPM: 103.7
Min nTPM: 62.0
P10809_1018
80.0
P10809_1037
92.1
P10809_1056
62.0
P10809_1075
82.6
P10809_1094
103.7
P10809_1106
93.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 88.0
Samples: 4
Max nTPM: 103.5
Min nTPM: 72.0
RHH5202_R3573
103.2
RHH5230_R3602
73.4
RHH5259_R3631
72.0
RHH5288_R3660
103.5
Effector memory CD8 T-cell nTPM: 110.4
Samples: 4
Max nTPM: 128.7
Min nTPM: 91.9
RHH5203_R3574
118.3
RHH5231_R3603
91.9
RHH5260_R3632
102.7
RHH5289_R3661
128.7
MAIT T-cell nTPM: 100.6
Samples: 4
Max nTPM: 111.3
Min nTPM: 86.1
RHH5233_R3605
86.1
RHH5205_R3576
111.3
RHH5262_R3634
108.1
RHH5297_R3663
96.9
Memory CD4 T-cell TFH nTPM: 109.2
Samples: 4
Max nTPM: 138.2
Min nTPM: 87.9
RHH5300_R3666
106.4
RHH5236_R3608
104.2
RHH5265_R3637
138.2
RHH5208_R3579
87.9
Memory CD4 T-cell Th1 nTPM: 95.2
Samples: 4
Max nTPM: 109.4
Min nTPM: 56.8
RHH5210_R3581
109.4
RHH5302_R3668
108.7
RHH5238_R3610
56.8
RHH5267_R3639
105.7
Memory CD4 T-cell Th1/Th17 nTPM: 95.8
Samples: 4
Max nTPM: 117.1
Min nTPM: 76.9
RHH5303_R3669
117.1
RHH5211_R3582
94.5
RHH5239_R3611
76.9
RHH5268_R3640
94.5
Memory CD4 T-cell Th17 nTPM: 105.2
Samples: 4
Max nTPM: 124.4
Min nTPM: 92.7
RHH5304_R3670
124.4
RHH5212_R3583
92.7
RHH5240_R3612
98.4
RHH5269_R3641
105.2
Memory CD4 T-cell Th2 nTPM: 127.6
Samples: 4
Max nTPM: 134.1
Min nTPM: 118.4
RHH5305_R3671
131.6
RHH5213_R3584
134.1
RHH5241_R3613
126.1
RHH5270_R3642
118.4
Naive CD4 T-cell nTPM: 108.4
Samples: 4
Max nTPM: 117.4
Min nTPM: 89.6
RHH5306_R3672
117.1
RHH5214_R3585
89.6
RHH5242_R3614
109.5
RHH5271_R3643
117.4
Naive CD8 T-cell nTPM: 97.8
Samples: 4
Max nTPM: 114.5
Min nTPM: 53.4
RHH5201_R3572
111.0
RHH5229_R3601
53.4
RHH5258_R3630
114.5
RHH5287_R3659
112.3
Non-Vd2 gdTCR nTPM: 96.2
Samples: 4
Max nTPM: 114.9
Min nTPM: 69.9
RHH5235_R3607
69.9
RHH5264_R3636
112.3
RHH5207_R3578
114.9
RHH5299_R3665
87.7
T-reg nTPM: 111.0
Samples: 4
Max nTPM: 128.3
Min nTPM: 95.2
RHH5301_R3667
104.4
RHH5237_R3609
128.3
RHH5266_R3638
95.2
RHH5209_R3580
116.1
Terminal effector memory CD4 T-cell nTPM: 93.8
Samples: 2
Max nTPM: 124.6
Min nTPM: 63.0
RHH5243_R3615
63.0
RHH5272_R3644
124.6
Terminal effector memory CD8 T-cell nTPM: 93.8
Samples: 4
Max nTPM: 98.7
Min nTPM: 89.6
RHH5232_R3604
89.6
RHH5204_R3575
95.9
RHH5261_R3633
90.9
RHH5296_R3662
98.7
Vd2 gdTCR nTPM: 93.1
Samples: 4
Max nTPM: 113.6
Min nTPM: 74.0
RHH5234_R3606
74.0
RHH5206_R3577
113.6
RHH5263_R3635
101.6
RHH5298_R3664
83.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
