HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:104.0 nTPM
HPA Brain:113.9 nTPM
GTEx:104.0 nTPM
FANTOM5:134.5 Scaled Tags Per Million
Pig:86.2 nTPM
Mouse:98.1 nTPM
Allen mouse:20.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031515Antibody HPA057316
Glial cells LowNot detected
Neuronal cells MediumNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 113.9
Sample id Sample description nTPM
Hippocampus
nTPM: 83.9
1898 Male, age 80, left hemisphere 113.9
1855 Male, age 76, left hemisphere 87.5
2621 Female, age 67, right hemisphere 78.7
2529 Female, age 94, left hemisphere 77.6
2148 Female, age 91, left hemisphere 73.1
1911 Female, age 85, right hemisphere 72.5
Dentate gyrus
nTPM: 85.9
1927 Female, age 91, both hemispheres 103.4
2010 Male, age 76, both hemispheres 91.6
2530 Female, age 94, left hemisphere 88.4
2246 Female, age 85, both hemispheres 84.1
2528 Male, age 74, both hemispheres 82.1
2531 Female, age 67, both hemispheres 65.7
Entorhinal gyrus
nTPM: 81.0
1938 Female, age 85, left hemisphere 96.9
2764 Male, age 80, right hemisphere 94.2
1787 Male, age 76, left hemisphere 84.4
2613 Female, age 94, left hemisphere 80.7
2117 Female, age 91, right hemisphere 67.5
2686 Male, age 75, right hemisphere 62.1
Hippocampus, CA1
nTPM: 97.8
2749 Male, age 80, left hemisphere 139.5
1873 Female, age 85, both hemispheres 97.8
2045 Male, age 76, both hemispheres 88.3
2527 Male, age 74, both hemispheres 86.4
2082 Female, age 91, right hemisphere 77.0
Hippocampus, CA2
nTPM: 90.2
1892 Male, age 76, both hemispheres 117.4
1963 Male, age 80, left hemisphere 106.1
2249 Male, age 74, both hemispheres 90.0
1940 Female, age 85, left hemisphere 82.5
2113 Female, age 91, right hemisphere 76.6
2437 Female, age 94, left hemisphere 68.7
Hippocampus, CA3
nTPM: 86.1
2137 Male, age 80, left hemisphere 114.2
2436 Male, age 74, both hemispheres 97.2
1867 Male, age 76, both hemispheres 92.3
1891 Female, age 85, both hemispheres 77.4
2620 Female, age 94, left hemisphere 74.0
2861 Female, age 67, both hemispheres 61.8
Parahippocampal cortex
nTPM: 89.7
1850 Male, age 80, both hemispheres 118.5
1933 Female, age 85, both hemispheres 106.4
2245 Female, age 91, both hemispheres 92.8
2250 Female, age 67, right hemisphere 92.3
1990 Female, age 91, right hemisphere 92.2
2532 Female, age 72, left hemisphere 91.6
2018 Male, age 76, both hemispheres 86.7
2693 Female, age 94, both hemispheres 81.6
2692 Male, age 74, both hemispheres 69.4
2622 Female, age 67, right hemisphere 65.1
Perirhinal gyrus
nTPM: 113.9
1847 Female, age 91, left hemisphere 135.8
1841 Female, age 85, right hemisphere 115.8
1794 Male, age 80, right hemisphere 115.6
2521 Female, age 94, right hemisphere 107.8
2848 Male, age 76, right hemisphere 94.5
Subiculum
nTPM: 78.7
1977 Female, age 85, both hemispheres 97.3
1901 Male, age 80, both hemispheres 86.0
2619 Male, age 74, both hemispheres 76.4
2438 Female, age 94, left hemisphere 75.8
2042 Male, age 76, both hemispheres 68.7
2729 Female, age 91, right hemisphere 68.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 104.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 104.0
Samples: 197

Max nTPM: 236.4
Min nTPM: 42.6
Std nTPM: 35.2
Median nTPM: 98.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 236.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 207.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 192.1
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 184.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 183.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 181.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 177.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 173.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 171.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 169.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 165.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 134.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 134.5
FF:10169-103B7 60 years, female 166.1
FF:10153-102I9 76 years, female 102.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.2
Pig sample Sample description nTPM
Subiculum
nTPM: 71.6
Samples: 4

Max nTPM: 85.0
Min nTPM: 65.9
Sample A Female 85.0
Sample B Female 65.9
Sample C Male 68.3
Sample D Male 67.0
Dorsal hippocampus
nTPM: 86.3
Samples: 4

Max nTPM: 109.1
Min nTPM: 73.3
Sample A Female 109.1
Sample B Female 86.1
Sample C Male 76.5
Sample D Male 73.3
Entorhinal cortex
nTPM: 71.2
Samples: 4

Max nTPM: 80.4
Min nTPM: 61.1
Sample A Female 74.9
Sample B Female 80.4
Sample C Male 68.2
Sample D Male 61.1
Ventral hippocampus
nTPM: 78.6
Samples: 4

Max nTPM: 98.4
Min nTPM: 68.1
Sample A Female 98.4
Sample B Female 68.1
Sample C Male 69.9
Sample D Male 77.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.1
Samples: 4

Max nTPM: 104.4
Min nTPM: 91.5
Sample A Male 91.5
Sample B Male 101.1
Sample C Female 95.3
Sample D Female 104.4
Hippocampal formation
nTPM: 94.5
Samples: 4

Max nTPM: 104.8
Min nTPM: 84.7
Sample A Male 104.8
Sample B Male 95.2
Sample C Female 93.4
Sample D Female 84.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.6
67787352 Antisense, RP_040920_01_A06, Mouse strain C57BL/6J (56 days, male) 22.4
74047915 Antisense, RP_051214_02_C12, Mouse strain C57BL/6J (56 days, male) 18.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org