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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
113.0
nTPM
Monaco:
393.1
nTPM
Schmiedel:
205.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.0
HPA sample
nTPM
gdT-cell nTPM: 71.4
Samples: 6
Max nTPM: 108.3
Min nTPM: 40.0
P10809_1007
63.6
P10809_1022
56.2
P10809_1041
40.0
P10809_1060
82.0
P10809_1077
78.3
P10809_1098
108.3
MAIT T-cell nTPM: 92.5
Samples: 6
Max nTPM: 137.0
Min nTPM: 50.6
P10809_1006
64.8
P10809_1024
80.7
P10809_1043
50.6
P10809_1062
102.8
P10809_1083
118.9
P10809_1097
137.0
Memory CD4 T-cell nTPM: 87.4
Samples: 6
Max nTPM: 126.2
Min nTPM: 52.1
P10809_1014
77.7
P10809_1026
69.7
P10809_1045
52.1
P10809_1064
100.3
P10809_1086
126.2
P10809_1113
98.5
Memory CD8 T-cell nTPM: 86.0
Samples: 5
Max nTPM: 113.2
Min nTPM: 48.7
P10809_1012
64.8
P10809_1027
90.7
P10809_1046
48.7
P10809_1065
112.6
P10809_1111
113.2
Naive CD4 T-cell nTPM: 69.7
Samples: 6
Max nTPM: 89.2
Min nTPM: 37.3
P10809_1015
88.8
P10809_1030
54.2
P10809_1049
37.3
P10809_1068
76.1
P10809_1085
89.2
P10809_1112
72.7
Naive CD8 T-cell nTPM: 81.1
Samples: 6
Max nTPM: 129.6
Min nTPM: 60.5
P10809_1016
65.9
P10809_1031
60.9
P10809_1050
60.5
P10809_1069
93.3
P10809_1087
129.6
P10809_1110
76.5
T-reg nTPM: 113.0
Samples: 6
Max nTPM: 129.7
Min nTPM: 81.8
P10809_1018
105.4
P10809_1037
129.7
P10809_1056
81.8
P10809_1075
127.4
P10809_1094
110.9
P10809_1106
122.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
393.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 277.0
Samples: 4
Max nTPM: 314.6
Min nTPM: 248.8
RHH5202_R3573
314.6
RHH5230_R3602
248.8
RHH5259_R3631
289.0
RHH5288_R3660
255.5
Effector memory CD8 T-cell nTPM: 307.4
Samples: 4
Max nTPM: 354.3
Min nTPM: 202.3
RHH5203_R3574
321.8
RHH5231_R3603
351.3
RHH5260_R3632
354.3
RHH5289_R3661
202.3
MAIT T-cell nTPM: 227.2
Samples: 4
Max nTPM: 257.6
Min nTPM: 203.2
RHH5233_R3605
221.2
RHH5205_R3576
257.6
RHH5262_R3634
203.2
RHH5297_R3663
226.8
Memory CD4 T-cell TFH nTPM: 355.2
Samples: 4
Max nTPM: 426.3
Min nTPM: 209.9
RHH5300_R3666
209.9
RHH5236_R3608
425.3
RHH5265_R3637
359.1
RHH5208_R3579
426.3
Memory CD4 T-cell Th1 nTPM: 327.6
Samples: 4
Max nTPM: 425.2
Min nTPM: 287.9
RHH5210_R3581
425.2
RHH5302_R3668
287.9
RHH5238_R3610
307.7
RHH5267_R3639
289.6
Memory CD4 T-cell Th1/Th17 nTPM: 290.9
Samples: 4
Max nTPM: 386.9
Min nTPM: 229.5
RHH5303_R3669
229.5
RHH5211_R3582
386.9
RHH5239_R3611
236.0
RHH5268_R3640
311.0
Memory CD4 T-cell Th17 nTPM: 319.8
Samples: 4
Max nTPM: 384.9
Min nTPM: 246.1
RHH5304_R3670
246.1
RHH5212_R3583
336.2
RHH5240_R3612
384.9
RHH5269_R3641
311.8
Memory CD4 T-cell Th2 nTPM: 303.5
Samples: 4
Max nTPM: 370.4
Min nTPM: 202.8
RHH5305_R3671
202.8
RHH5213_R3584
370.4
RHH5241_R3613
308.9
RHH5270_R3642
331.7
Naive CD4 T-cell nTPM: 393.1
Samples: 4
Max nTPM: 533.7
Min nTPM: 316.4
RHH5306_R3672
316.4
RHH5214_R3585
533.7
RHH5242_R3614
365.8
RHH5271_R3643
356.5
Naive CD8 T-cell nTPM: 360.3
Samples: 4
Max nTPM: 513.0
Min nTPM: 246.5
RHH5201_R3572
428.3
RHH5229_R3601
513.0
RHH5258_R3630
246.5
RHH5287_R3659
253.3
Non-Vd2 gdTCR nTPM: 265.3
Samples: 4
Max nTPM: 422.6
Min nTPM: 179.8
RHH5235_R3607
185.8
RHH5264_R3636
422.6
RHH5207_R3578
272.8
RHH5299_R3665
179.8
T-reg nTPM: 357.0
Samples: 4
Max nTPM: 443.5
Min nTPM: 273.7
RHH5301_R3667
273.7
RHH5237_R3609
411.0
RHH5266_R3638
299.9
RHH5209_R3580
443.5
Terminal effector memory CD4 T-cell nTPM: 335.4
Samples: 2
Max nTPM: 389.2
Min nTPM: 281.5
RHH5243_R3615
281.5
RHH5272_R3644
389.2
Terminal effector memory CD8 T-cell nTPM: 268.4
Samples: 4
Max nTPM: 363.5
Min nTPM: 196.2
RHH5232_R3604
224.2
RHH5204_R3575
363.5
RHH5261_R3633
289.8
RHH5296_R3662
196.2
Vd2 gdTCR nTPM: 249.4
Samples: 4
Max nTPM: 266.0
Min nTPM: 218.6
RHH5234_R3606
266.0
RHH5206_R3577
218.6
RHH5263_R3635
262.9
RHH5298_R3664
250.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
