HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:28.3 nTPM
HPA Brain:21.8 nTPM
GTEx:28.3 nTPM
FANTOM5:33.9 Scaled Tags Per Million
Pig:34.1 nTPM
Mouse:67.8 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002457Antibody CAB009931
Glial cells HighNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.8
Sample id Sample description nTPM
Hippocampus
nTPM: 21.0
2621 Female, age 67, right hemisphere 22.6
2529 Female, age 94, left hemisphere 22.3
1898 Male, age 80, left hemisphere 21.0
1911 Female, age 85, right hemisphere 20.4
1855 Male, age 76, left hemisphere 20.1
2148 Female, age 91, left hemisphere 19.4
Dentate gyrus
nTPM: 20.1
2010 Male, age 76, both hemispheres 23.4
2530 Female, age 94, left hemisphere 21.1
1927 Female, age 91, both hemispheres 19.8
2246 Female, age 85, both hemispheres 19.6
2528 Male, age 74, both hemispheres 18.6
2531 Female, age 67, both hemispheres 18.4
Entorhinal gyrus
nTPM: 20.3
1938 Female, age 85, left hemisphere 24.1
2117 Female, age 91, right hemisphere 21.5
1787 Male, age 76, left hemisphere 20.7
2764 Male, age 80, right hemisphere 18.8
2613 Female, age 94, left hemisphere 18.2
2686 Male, age 75, right hemisphere 18.1
Hippocampus, CA1
nTPM: 20.9
2749 Male, age 80, left hemisphere 23.1
1873 Female, age 85, both hemispheres 21.9
2045 Male, age 76, both hemispheres 19.8
2527 Male, age 74, both hemispheres 19.8
2082 Female, age 91, right hemisphere 19.6
Hippocampus, CA2
nTPM: 19.9
1892 Male, age 76, both hemispheres 21.8
2249 Male, age 74, both hemispheres 21.7
2437 Female, age 94, left hemisphere 19.6
1963 Male, age 80, left hemisphere 19.5
1940 Female, age 85, left hemisphere 18.8
2113 Female, age 91, right hemisphere 17.9
Hippocampus, CA3
nTPM: 19.7
1867 Male, age 76, both hemispheres 23.1
1891 Female, age 85, both hemispheres 22.1
2436 Male, age 74, both hemispheres 20.2
2137 Male, age 80, left hemisphere 19.8
2620 Female, age 94, left hemisphere 16.7
2861 Female, age 67, both hemispheres 16.4
Parahippocampal cortex
nTPM: 21.0
2018 Male, age 76, both hemispheres 24.0
1850 Male, age 80, both hemispheres 23.0
1990 Female, age 91, right hemisphere 21.3
2692 Male, age 74, both hemispheres 21.3
2532 Female, age 72, left hemisphere 20.8
1933 Female, age 85, both hemispheres 20.7
2245 Female, age 91, both hemispheres 20.2
2250 Female, age 67, right hemisphere 20.1
2693 Female, age 94, both hemispheres 19.4
2622 Female, age 67, right hemisphere 18.7
Perirhinal gyrus
nTPM: 21.8
1841 Female, age 85, right hemisphere 24.2
1794 Male, age 80, right hemisphere 22.2
2521 Female, age 94, right hemisphere 21.1
1847 Female, age 91, left hemisphere 20.8
2848 Male, age 76, right hemisphere 20.7
Subiculum
nTPM: 21.8
2042 Male, age 76, both hemispheres 23.9
2438 Female, age 94, left hemisphere 23.5
1901 Male, age 80, both hemispheres 22.3
2619 Male, age 74, both hemispheres 21.8
1977 Female, age 85, both hemispheres 20.9
2729 Female, age 91, right hemisphere 18.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.3
Samples: 197

Max nTPM: 43.6
Min nTPM: 20.3
Std nTPM: 4.3
Median nTPM: 27.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 43.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 42.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 40.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 40.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 40.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 39.8
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 38.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 38.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 38.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 37.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 36.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.9
FF:10153-102I9 76 years, female 35.6
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.1
Pig sample Sample description nTPM
Subiculum
nTPM: 28.4
Samples: 4

Max nTPM: 36.0
Min nTPM: 23.8
Sample A Female 36.0
Sample B Female 25.9
Sample C Male 23.8
Sample D Male 27.7
Dorsal hippocampus
nTPM: 34.1
Samples: 4

Max nTPM: 39.5
Min nTPM: 30.2
Sample A Female 39.5
Sample B Female 31.5
Sample C Male 35.1
Sample D Male 30.2
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 33.5
Min nTPM: 26.5
Sample A Female 33.5
Sample B Female 31.8
Sample C Male 27.6
Sample D Male 26.5
Ventral hippocampus
nTPM: 27.8
Samples: 4

Max nTPM: 32.2
Min nTPM: 24.1
Sample A Female 29.2
Sample B Female 24.1
Sample C Male 25.6
Sample D Male 32.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 67.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.8
Samples: 4

Max nTPM: 72.2
Min nTPM: 58.8
Sample A Male 68.3
Sample B Male 71.9
Sample C Female 72.2
Sample D Female 58.8
Hippocampal formation
nTPM: 65.7
Samples: 4

Max nTPM: 68.6
Min nTPM: 59.3
Sample A Male 68.6
Sample B Male 59.3
Sample C Female 68.1
Sample D Female 66.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
77925165 Antisense, RP_070320_02_D03, Mouse strain C57BL/6J (56 days, male) 2.6

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