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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
116.8
nTPM
Monaco:
115.9
nTPM
Schmiedel:
273.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.8
HPA sample
nTPM
gdT-cell nTPM: 76.8
Samples: 6
Max nTPM: 117.3
Min nTPM: 53.7
P10809_1007
117.3
P10809_1022
53.7
P10809_1041
72.0
P10809_1060
70.7
P10809_1077
87.1
P10809_1098
59.9
MAIT T-cell nTPM: 77.7
Samples: 6
Max nTPM: 93.1
Min nTPM: 52.4
P10809_1006
87.8
P10809_1024
72.5
P10809_1043
52.4
P10809_1062
93.1
P10809_1083
89.2
P10809_1097
71.3
Memory CD4 T-cell nTPM: 100.4
Samples: 6
Max nTPM: 128.1
Min nTPM: 71.4
P10809_1014
126.1
P10809_1026
108.4
P10809_1045
71.6
P10809_1064
96.5
P10809_1086
128.1
P10809_1113
71.4
Memory CD8 T-cell nTPM: 88.0
Samples: 5
Max nTPM: 115.6
Min nTPM: 57.2
P10809_1012
107.0
P10809_1027
88.0
P10809_1046
72.0
P10809_1065
115.6
P10809_1111
57.2
Naive CD4 T-cell nTPM: 93.0
Samples: 6
Max nTPM: 145.0
Min nTPM: 63.8
P10809_1015
145.0
P10809_1030
103.0
P10809_1049
72.2
P10809_1068
83.9
P10809_1085
90.3
P10809_1112
63.8
Naive CD8 T-cell nTPM: 88.5
Samples: 6
Max nTPM: 154.5
Min nTPM: 53.5
P10809_1016
154.5
P10809_1031
71.2
P10809_1050
53.5
P10809_1069
100.1
P10809_1087
94.0
P10809_1110
57.7
T-reg nTPM: 116.8
Samples: 6
Max nTPM: 148.0
Min nTPM: 89.5
P10809_1018
112.0
P10809_1037
148.0
P10809_1056
89.6
P10809_1075
120.6
P10809_1094
141.3
P10809_1106
89.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 73.5
Samples: 4
Max nTPM: 101.3
Min nTPM: 34.4
RHH5202_R3573
101.3
RHH5230_R3602
34.4
RHH5259_R3631
62.5
RHH5288_R3660
95.9
Effector memory CD8 T-cell nTPM: 66.2
Samples: 4
Max nTPM: 91.1
Min nTPM: 51.9
RHH5203_R3574
91.1
RHH5231_R3603
51.9
RHH5260_R3632
61.0
RHH5289_R3661
60.7
MAIT T-cell nTPM: 71.1
Samples: 4
Max nTPM: 99.9
Min nTPM: 47.5
RHH5233_R3605
72.4
RHH5205_R3576
64.7
RHH5262_R3634
47.5
RHH5297_R3663
99.9
Memory CD4 T-cell TFH nTPM: 103.8
Samples: 4
Max nTPM: 132.3
Min nTPM: 72.2
RHH5300_R3666
100.7
RHH5236_R3608
132.3
RHH5265_R3637
72.2
RHH5208_R3579
110.0
Memory CD4 T-cell Th1 nTPM: 95.2
Samples: 4
Max nTPM: 147.5
Min nTPM: 69.4
RHH5210_R3581
69.4
RHH5302_R3668
147.5
RHH5238_R3610
84.5
RHH5267_R3639
79.5
Memory CD4 T-cell Th1/Th17 nTPM: 79.9
Samples: 4
Max nTPM: 120.5
Min nTPM: 54.9
RHH5303_R3669
120.5
RHH5211_R3582
63.5
RHH5239_R3611
54.9
RHH5268_R3640
80.6
Memory CD4 T-cell Th17 nTPM: 61.1
Samples: 4
Max nTPM: 76.0
Min nTPM: 44.2
RHH5304_R3670
76.0
RHH5212_R3583
72.5
RHH5240_R3612
44.2
RHH5269_R3641
51.8
Memory CD4 T-cell Th2 nTPM: 72.5
Samples: 4
Max nTPM: 84.5
Min nTPM: 61.0
RHH5305_R3671
78.3
RHH5213_R3584
66.0
RHH5241_R3613
84.5
RHH5270_R3642
61.0
Naive CD4 T-cell nTPM: 72.4
Samples: 4
Max nTPM: 113.8
Min nTPM: 50.1
RHH5306_R3672
72.2
RHH5214_R3585
113.8
RHH5242_R3614
50.1
RHH5271_R3643
53.3
Naive CD8 T-cell nTPM: 70.0
Samples: 4
Max nTPM: 87.3
Min nTPM: 57.8
RHH5201_R3572
87.3
RHH5229_R3601
57.8
RHH5258_R3630
70.6
RHH5287_R3659
64.4
Non-Vd2 gdTCR nTPM: 82.0
Samples: 4
Max nTPM: 117.4
Min nTPM: 42.8
RHH5235_R3607
42.8
RHH5264_R3636
72.3
RHH5207_R3578
95.4
RHH5299_R3665
117.4
T-reg nTPM: 95.2
Samples: 4
Max nTPM: 118.2
Min nTPM: 66.8
RHH5301_R3667
118.2
RHH5237_R3609
106.5
RHH5266_R3638
66.8
RHH5209_R3580
89.2
Terminal effector memory CD4 T-cell nTPM: 72.6
Samples: 2
Max nTPM: 86.6
Min nTPM: 58.6
RHH5243_R3615
58.6
RHH5272_R3644
86.6
Terminal effector memory CD8 T-cell nTPM: 115.9
Samples: 4
Max nTPM: 243.6
Min nTPM: 50.9
RHH5232_R3604
75.2
RHH5204_R3575
243.6
RHH5261_R3633
50.9
RHH5296_R3662
94.0
Vd2 gdTCR nTPM: 99.2
Samples: 4
Max nTPM: 145.4
Min nTPM: 52.1
RHH5234_R3606
64.4
RHH5206_R3577
145.4
RHH5263_R3635
52.1
RHH5298_R3664
134.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
