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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
95.1
nTPM
Monaco:
1428.4
nTPM
Schmiedel:
967.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.1
HPA sample
nTPM
gdT-cell nTPM: 93.4
Samples: 6
Max nTPM: 116.2
Min nTPM: 66.5
P10809_1007
115.7
P10809_1022
76.8
P10809_1041
97.8
P10809_1060
116.2
P10809_1077
87.1
P10809_1098
66.5
MAIT T-cell nTPM: 95.1
Samples: 6
Max nTPM: 132.5
Min nTPM: 76.2
P10809_1006
132.5
P10809_1024
89.0
P10809_1043
95.3
P10809_1062
76.2
P10809_1083
100.2
P10809_1097
77.6
Memory CD4 T-cell nTPM: 83.3
Samples: 6
Max nTPM: 107.7
Min nTPM: 60.1
P10809_1014
107.7
P10809_1026
79.8
P10809_1045
83.5
P10809_1064
60.1
P10809_1086
87.4
P10809_1113
81.5
Memory CD8 T-cell nTPM: 85.1
Samples: 5
Max nTPM: 105.5
Min nTPM: 74.7
P10809_1012
105.5
P10809_1027
86.9
P10809_1046
77.8
P10809_1065
74.7
P10809_1111
80.4
Naive CD4 T-cell nTPM: 81.4
Samples: 6
Max nTPM: 129.1
Min nTPM: 58.6
P10809_1015
129.1
P10809_1030
72.6
P10809_1049
58.6
P10809_1068
71.0
P10809_1085
79.0
P10809_1112
77.8
Naive CD8 T-cell nTPM: 79.8
Samples: 6
Max nTPM: 124.4
Min nTPM: 57.4
P10809_1016
124.4
P10809_1031
76.5
P10809_1050
75.2
P10809_1069
57.4
P10809_1087
76.8
P10809_1110
68.7
T-reg nTPM: 75.0
Samples: 6
Max nTPM: 103.0
Min nTPM: 54.7
P10809_1018
103.0
P10809_1037
56.5
P10809_1056
54.7
P10809_1075
55.9
P10809_1094
84.1
P10809_1106
95.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1428.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 701.4
Samples: 4
Max nTPM: 892.9
Min nTPM: 447.3
RHH5202_R3573
794.9
RHH5230_R3602
670.4
RHH5259_R3631
447.3
RHH5288_R3660
892.9
Effector memory CD8 T-cell nTPM: 619.7
Samples: 4
Max nTPM: 726.6
Min nTPM: 400.1
RHH5203_R3574
724.8
RHH5231_R3603
627.4
RHH5260_R3632
400.1
RHH5289_R3661
726.6
MAIT T-cell nTPM: 744.9
Samples: 4
Max nTPM: 946.2
Min nTPM: 508.9
RHH5233_R3605
633.6
RHH5205_R3576
508.9
RHH5262_R3634
946.2
RHH5297_R3663
890.8
Memory CD4 T-cell TFH nTPM: 1027.8
Samples: 4
Max nTPM: 1132.8
Min nTPM: 956.8
RHH5300_R3666
1000.6
RHH5236_R3608
1132.8
RHH5265_R3637
956.8
RHH5208_R3579
1020.8
Memory CD4 T-cell Th1 nTPM: 864.2
Samples: 4
Max nTPM: 1185.3
Min nTPM: 358.0
RHH5210_R3581
1185.3
RHH5302_R3668
1067.7
RHH5238_R3610
358.0
RHH5267_R3639
845.9
Memory CD4 T-cell Th1/Th17 nTPM: 768.1
Samples: 4
Max nTPM: 1173.1
Min nTPM: 279.6
RHH5303_R3669
1173.1
RHH5211_R3582
999.8
RHH5239_R3611
279.6
RHH5268_R3640
619.8
Memory CD4 T-cell Th17 nTPM: 799.7
Samples: 4
Max nTPM: 1049.9
Min nTPM: 582.2
RHH5304_R3670
943.6
RHH5212_R3583
1049.9
RHH5240_R3612
582.2
RHH5269_R3641
623.0
Memory CD4 T-cell Th2 nTPM: 1011.2
Samples: 4
Max nTPM: 1142.3
Min nTPM: 884.6
RHH5305_R3671
1142.3
RHH5213_R3584
1097.8
RHH5241_R3613
884.6
RHH5270_R3642
920.0
Naive CD4 T-cell nTPM: 1428.4
Samples: 4
Max nTPM: 1554.8
Min nTPM: 1172.8
RHH5306_R3672
1554.8
RHH5214_R3585
1514.0
RHH5242_R3614
1172.8
RHH5271_R3643
1472.0
Naive CD8 T-cell nTPM: 1125.0
Samples: 4
Max nTPM: 1542.7
Min nTPM: 492.1
RHH5201_R3572
1542.7
RHH5229_R3601
492.1
RHH5258_R3630
1267.7
RHH5287_R3659
1197.5
Non-Vd2 gdTCR nTPM: 631.8
Samples: 4
Max nTPM: 812.1
Min nTPM: 330.8
RHH5235_R3607
330.8
RHH5264_R3636
812.1
RHH5207_R3578
717.9
RHH5299_R3665
666.5
T-reg nTPM: 1070.8
Samples: 4
Max nTPM: 1172.8
Min nTPM: 941.4
RHH5301_R3667
1172.8
RHH5237_R3609
1123.4
RHH5266_R3638
941.4
RHH5209_R3580
1045.5
Terminal effector memory CD4 T-cell nTPM: 676.0
Samples: 2
Max nTPM: 897.5
Min nTPM: 454.5
RHH5243_R3615
454.5
RHH5272_R3644
897.5
Terminal effector memory CD8 T-cell nTPM: 564.9
Samples: 4
Max nTPM: 669.5
Min nTPM: 383.1
RHH5232_R3604
669.2
RHH5204_R3575
669.5
RHH5261_R3633
383.1
RHH5296_R3662
537.7
Vd2 gdTCR nTPM: 679.3
Samples: 4
Max nTPM: 759.4
Min nTPM: 530.5
RHH5234_R3606
756.7
RHH5206_R3577
759.4
RHH5263_R3635
530.5
RHH5298_R3664
670.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
