HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:66.1 nTPM
HPA Brain:29.0 nTPM
GTEx:66.1 nTPM
FANTOM5:73.8 Scaled Tags Per Million
Pig:22.6 nTPM
Mouse:19.2 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055721
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.0
Sample id Sample description nTPM
Hippocampus
nTPM: 27.8
1898 Male, age 80, left hemisphere 38.7
2529 Female, age 94, left hemisphere 28.8
1855 Male, age 76, left hemisphere 28.2
1911 Female, age 85, right hemisphere 27.1
2148 Female, age 91, left hemisphere 25.9
2621 Female, age 67, right hemisphere 18.1
Dentate gyrus
nTPM: 21.5
2246 Female, age 85, both hemispheres 26.2
2528 Male, age 74, both hemispheres 25.5
2530 Female, age 94, left hemisphere 23.0
2010 Male, age 76, both hemispheres 22.0
1927 Female, age 91, both hemispheres 20.5
2531 Female, age 67, both hemispheres 11.8
Entorhinal gyrus
nTPM: 25.1
2117 Female, age 91, right hemisphere 35.5
1938 Female, age 85, left hemisphere 32.5
1787 Male, age 76, left hemisphere 25.5
2764 Male, age 80, right hemisphere 24.8
2686 Male, age 75, right hemisphere 16.4
2613 Female, age 94, left hemisphere 15.8
Hippocampus, CA1
nTPM: 25.4
2527 Male, age 74, both hemispheres 32.1
1873 Female, age 85, both hemispheres 29.9
2749 Male, age 80, left hemisphere 27.6
2082 Female, age 91, right hemisphere 22.4
2045 Male, age 76, both hemispheres 15.1
Hippocampus, CA2
nTPM: 24.4
2249 Male, age 74, both hemispheres 29.5
2113 Female, age 91, right hemisphere 26.1
1940 Female, age 85, left hemisphere 25.2
1963 Male, age 80, left hemisphere 23.1
2437 Female, age 94, left hemisphere 22.0
1892 Male, age 76, both hemispheres 20.6
Hippocampus, CA3
nTPM: 23.1
2436 Male, age 74, both hemispheres 31.7
1891 Female, age 85, both hemispheres 28.4
2137 Male, age 80, left hemisphere 25.8
1867 Male, age 76, both hemispheres 21.4
2620 Female, age 94, left hemisphere 17.5
2861 Female, age 67, both hemispheres 13.7
Parahippocampal cortex
nTPM: 25.9
1933 Female, age 85, both hemispheres 33.8
1850 Male, age 80, both hemispheres 32.2
1990 Female, age 91, right hemisphere 26.7
2245 Female, age 91, both hemispheres 26.4
2692 Male, age 74, both hemispheres 25.6
2250 Female, age 67, right hemisphere 24.5
2532 Female, age 72, left hemisphere 23.2
2622 Female, age 67, right hemisphere 23.1
2018 Male, age 76, both hemispheres 22.7
2693 Female, age 94, both hemispheres 20.9
Perirhinal gyrus
nTPM: 29.0
1794 Male, age 80, right hemisphere 36.4
1841 Female, age 85, right hemisphere 32.3
1847 Female, age 91, left hemisphere 31.0
2521 Female, age 94, right hemisphere 24.8
2848 Male, age 76, right hemisphere 20.4
Subiculum
nTPM: 28.7
2619 Male, age 74, both hemispheres 32.1
1901 Male, age 80, both hemispheres 31.6
1977 Female, age 85, both hemispheres 30.1
2729 Female, age 91, right hemisphere 29.5
2438 Female, age 94, left hemisphere 25.1
2042 Male, age 76, both hemispheres 23.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.1
Samples: 197

Max nTPM: 116.9
Min nTPM: 30.7
Std nTPM: 14.3
Median nTPM: 64.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 116.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 116.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 110.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 99.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 98.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 94.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 94.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 93.2
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 92.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 91.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 90.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.8
FF:10153-102I9 76 years, female 89.4
FF:10169-103B7 60 years, female 58.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.6
Pig sample Sample description nTPM
Subiculum
nTPM: 20.7
Samples: 4

Max nTPM: 25.3
Min nTPM: 17.8
Sample A Female 25.3
Sample B Female 21.2
Sample C Male 17.8
Sample D Male 18.5
Dorsal hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 29.9
Min nTPM: 14.6
Sample A Female 29.9
Sample B Female 19.4
Sample C Male 26.5
Sample D Male 14.6
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 21.1
Min nTPM: 12.8
Sample A Female 17.9
Sample B Female 21.1
Sample C Male 19.7
Sample D Male 12.8
Ventral hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 28.2
Min nTPM: 17.6
Sample A Female 24.6
Sample B Female 17.8
Sample C Male 28.2
Sample D Male 17.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 20.7
Min nTPM: 17.1
Sample A Male 20.7
Sample B Male 18.3
Sample C Female 19.4
Sample D Female 17.1
Hippocampal formation
nTPM: 19.2
Samples: 4

Max nTPM: 21.9
Min nTPM: 16.0
Sample A Male 21.9
Sample B Male 18.4
Sample C Female 16.0
Sample D Female 20.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
76097729 Antisense, RP_060626_01_E01, Mouse strain C57BL/6J (56 days, male) 0.6

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