HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:20.3 nTPM
HPA Brain:44.1 nTPM
GTEx:20.3 nTPM
FANTOM5:68.1 Scaled Tags Per Million
Pig:28.9 nTPM
Mouse:24.2 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001119Antibody CAB009392
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.1
Sample id Sample description nTPM
Hippocampus
nTPM: 42.9
1911 Female, age 85, right hemisphere 45.7
1898 Male, age 80, left hemisphere 43.8
2621 Female, age 67, right hemisphere 42.5
2529 Female, age 94, left hemisphere 42.3
2148 Female, age 91, left hemisphere 41.6
1855 Male, age 76, left hemisphere 41.3
Dentate gyrus
nTPM: 42.5
1927 Female, age 91, both hemispheres 47.3
2531 Female, age 67, both hemispheres 46.2
2010 Male, age 76, both hemispheres 42.8
2530 Female, age 94, left hemisphere 42.5
2246 Female, age 85, both hemispheres 39.6
2528 Male, age 74, both hemispheres 36.8
Entorhinal gyrus
nTPM: 40.4
1938 Female, age 85, left hemisphere 43.8
2117 Female, age 91, right hemisphere 42.5
2764 Male, age 80, right hemisphere 41.8
2613 Female, age 94, left hemisphere 41.1
1787 Male, age 76, left hemisphere 37.3
2686 Male, age 75, right hemisphere 35.9
Hippocampus, CA1
nTPM: 43.0
2045 Male, age 76, both hemispheres 49.0
2749 Male, age 80, left hemisphere 48.1
1873 Female, age 85, both hemispheres 42.1
2527 Male, age 74, both hemispheres 39.9
2082 Female, age 91, right hemisphere 36.0
Hippocampus, CA2
nTPM: 41.7
1940 Female, age 85, left hemisphere 45.8
1963 Male, age 80, left hemisphere 45.7
1892 Male, age 76, both hemispheres 43.3
2437 Female, age 94, left hemisphere 41.4
2113 Female, age 91, right hemisphere 37.4
2249 Male, age 74, both hemispheres 36.3
Hippocampus, CA3
nTPM: 44.1
2861 Female, age 67, both hemispheres 49.2
2620 Female, age 94, left hemisphere 48.8
2137 Male, age 80, left hemisphere 45.6
1867 Male, age 76, both hemispheres 44.5
1891 Female, age 85, both hemispheres 43.4
2436 Male, age 74, both hemispheres 33.2
Parahippocampal cortex
nTPM: 41.2
2532 Female, age 72, left hemisphere 46.0
1990 Female, age 91, right hemisphere 43.2
2018 Male, age 76, both hemispheres 43.1
1933 Female, age 85, both hemispheres 42.7
2245 Female, age 91, both hemispheres 42.6
2622 Female, age 67, right hemisphere 42.3
1850 Male, age 80, both hemispheres 40.9
2250 Female, age 67, right hemisphere 38.3
2692 Male, age 74, both hemispheres 36.5
2693 Female, age 94, both hemispheres 36.4
Perirhinal gyrus
nTPM: 40.4
1841 Female, age 85, right hemisphere 42.4
1847 Female, age 91, left hemisphere 42.1
1794 Male, age 80, right hemisphere 39.7
2521 Female, age 94, right hemisphere 39.2
2848 Male, age 76, right hemisphere 38.7
Subiculum
nTPM: 41.2
2042 Male, age 76, both hemispheres 46.2
1977 Female, age 85, both hemispheres 44.4
1901 Male, age 80, both hemispheres 42.0
2619 Male, age 74, both hemispheres 39.7
2729 Female, age 91, right hemisphere 39.3
2438 Female, age 94, left hemisphere 35.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.3
Samples: 197

Max nTPM: 35.9
Min nTPM: 14.8
Std nTPM: 2.7
Median nTPM: 19.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 35.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 29.6
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 26.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 26.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 26.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 26.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 25.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 25.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 25.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 25.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 25.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.1
FF:10153-102I9 76 years, female 93.7
FF:10169-103B7 60 years, female 42.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.9
Pig sample Sample description nTPM
Subiculum
nTPM: 27.7
Samples: 4

Max nTPM: 33.8
Min nTPM: 24.2
Sample A Female 33.8
Sample B Female 26.0
Sample C Male 26.7
Sample D Male 24.2
Dorsal hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 33.5
Min nTPM: 24.4
Sample A Female 33.5
Sample B Female 29.9
Sample C Male 26.8
Sample D Male 24.4
Entorhinal cortex
nTPM: 29.0
Samples: 4

Max nTPM: 31.5
Min nTPM: 25.4
Sample A Female 29.8
Sample B Female 29.1
Sample C Male 31.5
Sample D Male 25.4
Ventral hippocampus
nTPM: 27.9
Samples: 4

Max nTPM: 33.0
Min nTPM: 22.5
Sample A Female 24.1
Sample B Female 22.5
Sample C Male 31.9
Sample D Male 33.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 23.5
Min nTPM: 21.6
Sample A Male 22.4
Sample B Male 21.6
Sample C Female 23.5
Sample D Female 23.4
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 27.7
Min nTPM: 21.2
Sample A Male 21.6
Sample B Male 26.2
Sample C Female 27.7
Sample D Female 21.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
75831764 Antisense, RP_060601_02_E01, Mouse strain C57BL/6J (56 days, male) 0.8
70795874 Antisense, RP_050712_02_B06, Mouse strain C57BL/6J (56 days, male) 0.1

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