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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
133.5
nTPM
Monaco:
205.2
nTPM
Schmiedel:
487.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
133.5
HPA sample
nTPM
gdT-cell nTPM: 79.8
Samples: 6
Max nTPM: 103.8
Min nTPM: 63.9
P10809_1007
71.9
P10809_1022
103.8
P10809_1041
80.4
P10809_1060
65.9
P10809_1077
63.9
P10809_1098
92.6
MAIT T-cell nTPM: 108.6
Samples: 6
Max nTPM: 125.9
Min nTPM: 95.3
P10809_1006
105.0
P10809_1024
125.9
P10809_1043
106.8
P10809_1062
104.6
P10809_1083
95.3
P10809_1097
113.8
Memory CD4 T-cell nTPM: 99.2
Samples: 6
Max nTPM: 117.8
Min nTPM: 79.5
P10809_1014
100.1
P10809_1026
114.1
P10809_1045
117.8
P10809_1064
82.1
P10809_1086
79.5
P10809_1113
101.7
Memory CD8 T-cell nTPM: 95.4
Samples: 5
Max nTPM: 124.7
Min nTPM: 73.9
P10809_1012
81.3
P10809_1027
124.7
P10809_1046
106.9
P10809_1065
73.9
P10809_1111
90.2
Naive CD4 T-cell nTPM: 133.5
Samples: 6
Max nTPM: 161.6
Min nTPM: 85.3
P10809_1015
121.4
P10809_1030
161.4
P10809_1049
161.6
P10809_1068
137.9
P10809_1085
85.3
P10809_1112
133.6
Naive CD8 T-cell nTPM: 118.1
Samples: 6
Max nTPM: 144.0
Min nTPM: 71.0
P10809_1016
134.4
P10809_1031
144.0
P10809_1050
109.4
P10809_1069
119.0
P10809_1087
71.0
P10809_1110
130.8
T-reg nTPM: 66.0
Samples: 6
Max nTPM: 82.8
Min nTPM: 53.2
P10809_1018
53.2
P10809_1037
82.8
P10809_1056
70.6
P10809_1075
58.3
P10809_1094
75.9
P10809_1106
55.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
205.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 130.6
Samples: 4
Max nTPM: 162.3
Min nTPM: 78.0
RHH5202_R3573
162.3
RHH5230_R3602
122.5
RHH5259_R3631
78.0
RHH5288_R3660
159.7
Effector memory CD8 T-cell nTPM: 127.3
Samples: 4
Max nTPM: 158.0
Min nTPM: 87.3
RHH5203_R3574
132.0
RHH5231_R3603
158.0
RHH5260_R3632
87.3
RHH5289_R3661
131.9
MAIT T-cell nTPM: 141.1
Samples: 4
Max nTPM: 172.8
Min nTPM: 101.2
RHH5233_R3605
127.4
RHH5205_R3576
101.2
RHH5262_R3634
162.8
RHH5297_R3663
172.8
Memory CD4 T-cell TFH nTPM: 171.6
Samples: 4
Max nTPM: 222.5
Min nTPM: 146.9
RHH5300_R3666
150.7
RHH5236_R3608
166.1
RHH5265_R3637
146.9
RHH5208_R3579
222.5
Memory CD4 T-cell Th1 nTPM: 141.9
Samples: 4
Max nTPM: 177.7
Min nTPM: 85.4
RHH5210_R3581
177.0
RHH5302_R3668
177.7
RHH5238_R3610
85.4
RHH5267_R3639
127.4
Memory CD4 T-cell Th1/Th17 nTPM: 168.0
Samples: 4
Max nTPM: 236.2
Min nTPM: 102.3
RHH5303_R3669
236.2
RHH5211_R3582
203.2
RHH5239_R3611
102.3
RHH5268_R3640
130.1
Memory CD4 T-cell Th17 nTPM: 155.7
Samples: 4
Max nTPM: 184.8
Min nTPM: 132.8
RHH5304_R3670
165.1
RHH5212_R3583
184.8
RHH5240_R3612
132.8
RHH5269_R3641
140.2
Memory CD4 T-cell Th2 nTPM: 197.7
Samples: 4
Max nTPM: 212.6
Min nTPM: 176.5
RHH5305_R3671
212.6
RHH5213_R3584
201.6
RHH5241_R3613
200.2
RHH5270_R3642
176.5
Naive CD4 T-cell nTPM: 203.0
Samples: 4
Max nTPM: 235.3
Min nTPM: 162.4
RHH5306_R3672
235.3
RHH5214_R3585
218.4
RHH5242_R3614
162.4
RHH5271_R3643
195.9
Naive CD8 T-cell nTPM: 205.2
Samples: 4
Max nTPM: 259.8
Min nTPM: 104.3
RHH5201_R3572
254.8
RHH5229_R3601
104.3
RHH5258_R3630
259.8
RHH5287_R3659
201.8
Non-Vd2 gdTCR nTPM: 108.6
Samples: 4
Max nTPM: 151.5
Min nTPM: 59.8
RHH5235_R3607
59.8
RHH5264_R3636
151.5
RHH5207_R3578
116.3
RHH5299_R3665
106.7
T-reg nTPM: 139.9
Samples: 4
Max nTPM: 162.8
Min nTPM: 114.9
RHH5301_R3667
162.8
RHH5237_R3609
141.2
RHH5266_R3638
114.9
RHH5209_R3580
140.5
Terminal effector memory CD4 T-cell nTPM: 120.0
Samples: 2
Max nTPM: 145.8
Min nTPM: 94.2
RHH5243_R3615
94.2
RHH5272_R3644
145.8
Terminal effector memory CD8 T-cell nTPM: 113.4
Samples: 4
Max nTPM: 128.8
Min nTPM: 77.5
RHH5232_R3604
128.8
RHH5204_R3575
124.7
RHH5261_R3633
77.5
RHH5296_R3662
122.7
Vd2 gdTCR nTPM: 138.4
Samples: 4
Max nTPM: 151.2
Min nTPM: 128.5
RHH5234_R3606
151.2
RHH5206_R3577
138.7
RHH5263_R3635
128.5
RHH5298_R3664
135.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
