HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:177.4 nTPM
HPA Brain:113.0 nTPM
GTEx:177.4 nTPM
FANTOM5:116.8 Scaled Tags Per Million
Pig:79.5 nTPM
Mouse:69.0 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000637
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 113.0
Sample id Sample description nTPM
Hippocampus
nTPM: 108.0
2148 Female, age 91, left hemisphere 114.5
1911 Female, age 85, right hemisphere 111.3
2529 Female, age 94, left hemisphere 110.4
1855 Male, age 76, left hemisphere 109.2
2621 Female, age 67, right hemisphere 108.8
1898 Male, age 80, left hemisphere 93.8
Dentate gyrus
nTPM: 109.2
2531 Female, age 67, both hemispheres 125.9
2530 Female, age 94, left hemisphere 123.8
2246 Female, age 85, both hemispheres 110.8
2010 Male, age 76, both hemispheres 101.2
1927 Female, age 91, both hemispheres 99.1
2528 Male, age 74, both hemispheres 94.3
Entorhinal gyrus
nTPM: 107.5
2686 Male, age 75, right hemisphere 132.5
2613 Female, age 94, left hemisphere 113.7
2117 Female, age 91, right hemisphere 102.5
2764 Male, age 80, right hemisphere 99.6
1938 Female, age 85, left hemisphere 98.7
1787 Male, age 76, left hemisphere 98.2
Hippocampus, CA1
nTPM: 106.8
2082 Female, age 91, right hemisphere 115.7
2045 Male, age 76, both hemispheres 113.0
1873 Female, age 85, both hemispheres 103.7
2749 Male, age 80, left hemisphere 101.9
2527 Male, age 74, both hemispheres 99.9
Hippocampus, CA2
nTPM: 104.1
2113 Female, age 91, right hemisphere 115.1
1940 Female, age 85, left hemisphere 112.1
1892 Male, age 76, both hemispheres 104.9
2437 Female, age 94, left hemisphere 99.2
1963 Male, age 80, left hemisphere 98.8
2249 Male, age 74, both hemispheres 94.5
Hippocampus, CA3
nTPM: 110.8
2861 Female, age 67, both hemispheres 130.5
2137 Male, age 80, left hemisphere 118.1
2620 Female, age 94, left hemisphere 115.9
1867 Male, age 76, both hemispheres 111.7
1891 Female, age 85, both hemispheres 102.1
2436 Male, age 74, both hemispheres 86.7
Parahippocampal cortex
nTPM: 109.2
2622 Female, age 67, right hemisphere 131.2
2245 Female, age 91, both hemispheres 117.1
2532 Female, age 72, left hemisphere 116.8
2692 Male, age 74, both hemispheres 115.8
2693 Female, age 94, both hemispheres 113.7
2018 Male, age 76, both hemispheres 111.0
1990 Female, age 91, right hemisphere 97.2
1850 Male, age 80, both hemispheres 96.9
2250 Female, age 67, right hemisphere 96.9
1933 Female, age 85, both hemispheres 95.2
Perirhinal gyrus
nTPM: 96.9
2848 Male, age 76, right hemisphere 116.0
2521 Female, age 94, right hemisphere 101.8
1841 Female, age 85, right hemisphere 97.2
1794 Male, age 80, right hemisphere 86.1
1847 Female, age 91, left hemisphere 83.3
Subiculum
nTPM: 113.0
2438 Female, age 94, left hemisphere 144.8
2042 Male, age 76, both hemispheres 119.9
2729 Female, age 91, right hemisphere 111.2
2619 Male, age 74, both hemispheres 104.1
1901 Male, age 80, both hemispheres 100.3
1977 Female, age 85, both hemispheres 97.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 177.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 177.4
Samples: 197

Max nTPM: 288.5
Min nTPM: 95.8
Std nTPM: 34.4
Median nTPM: 174.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 288.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 270.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 267.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 265.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 254.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 247.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 245.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 243.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 238.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 237.9
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 237.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.8
FF:10153-102I9 76 years, female 171.4
FF:10169-103B7 60 years, female 62.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 79.5
Pig sample Sample description nTPM
Subiculum
nTPM: 75.5
Samples: 4

Max nTPM: 79.5
Min nTPM: 71.7
Sample A Female 79.5
Sample B Female 74.5
Sample C Male 71.7
Sample D Male 76.2
Dorsal hippocampus
nTPM: 78.1
Samples: 4

Max nTPM: 83.9
Min nTPM: 74.4
Sample A Female 78.6
Sample B Female 74.4
Sample C Male 83.9
Sample D Male 75.3
Entorhinal cortex
nTPM: 79.5
Samples: 4

Max nTPM: 82.9
Min nTPM: 75.7
Sample A Female 76.8
Sample B Female 82.9
Sample C Male 75.7
Sample D Male 82.7
Ventral hippocampus
nTPM: 78.2
Samples: 4

Max nTPM: 84.8
Min nTPM: 70.4
Sample A Female 80.5
Sample B Female 70.4
Sample C Male 77.1
Sample D Male 84.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 69.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.9
Samples: 4

Max nTPM: 80.6
Min nTPM: 44.4
Sample A Male 62.0
Sample B Male 80.6
Sample C Female 72.6
Sample D Female 44.4
Hippocampal formation
nTPM: 69.0
Samples: 4

Max nTPM: 80.4
Min nTPM: 56.3
Sample A Male 80.4
Sample B Male 73.7
Sample C Female 56.3
Sample D Female 65.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
74431266 Antisense, RP_060207_01_F12, Mouse strain C57BL/6J (56 days, male) 15.3
70919579 Antisense, RP_050713_01_F03, Mouse strain C57BL/6J (56 days, male) 4.3

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