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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
449.6
nTPM
Monaco:
156.8
nTPM
Schmiedel:
265.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
449.6
HPA sample
nTPM
gdT-cell nTPM: 423.6
Samples: 6
Max nTPM: 515.8
Min nTPM: 270.5
P10809_1007
270.5
P10809_1022
401.1
P10809_1041
509.0
P10809_1060
402.9
P10809_1077
515.8
P10809_1098
442.0
MAIT T-cell nTPM: 433.5
Samples: 6
Max nTPM: 484.6
Min nTPM: 254.4
P10809_1006
254.4
P10809_1024
482.5
P10809_1043
468.8
P10809_1062
464.0
P10809_1083
484.6
P10809_1097
446.5
Memory CD4 T-cell nTPM: 414.4
Samples: 6
Max nTPM: 527.5
Min nTPM: 265.8
P10809_1014
265.8
P10809_1026
401.7
P10809_1045
368.7
P10809_1064
508.7
P10809_1086
527.5
P10809_1113
414.1
Memory CD8 T-cell nTPM: 416.8
Samples: 5
Max nTPM: 504.9
Min nTPM: 279.9
P10809_1012
279.9
P10809_1027
442.2
P10809_1046
402.3
P10809_1065
504.9
P10809_1111
454.5
Naive CD4 T-cell nTPM: 307.3
Samples: 6
Max nTPM: 441.8
Min nTPM: 156.4
P10809_1015
156.4
P10809_1030
304.8
P10809_1049
388.0
P10809_1068
284.7
P10809_1085
441.8
P10809_1112
268.3
Naive CD8 T-cell nTPM: 375.6
Samples: 6
Max nTPM: 550.6
Min nTPM: 173.1
P10809_1016
173.1
P10809_1031
375.3
P10809_1050
389.1
P10809_1069
460.2
P10809_1087
550.6
P10809_1110
305.4
T-reg nTPM: 449.6
Samples: 6
Max nTPM: 656.4
Min nTPM: 274.1
P10809_1018
274.1
P10809_1037
400.3
P10809_1056
656.4
P10809_1075
446.3
P10809_1094
470.1
P10809_1106
450.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
156.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 99.9
Samples: 4
Max nTPM: 130.3
Min nTPM: 70.2
RHH5202_R3573
124.3
RHH5230_R3602
70.2
RHH5259_R3631
74.6
RHH5288_R3660
130.3
Effector memory CD8 T-cell nTPM: 97.5
Samples: 4
Max nTPM: 143.3
Min nTPM: 60.0
RHH5203_R3574
143.3
RHH5231_R3603
106.6
RHH5260_R3632
80.1
RHH5289_R3661
60.0
MAIT T-cell nTPM: 105.9
Samples: 4
Max nTPM: 124.5
Min nTPM: 79.5
RHH5233_R3605
96.7
RHH5205_R3576
122.8
RHH5262_R3634
79.5
RHH5297_R3663
124.5
Memory CD4 T-cell TFH nTPM: 105.9
Samples: 4
Max nTPM: 167.1
Min nTPM: 64.6
RHH5300_R3666
89.1
RHH5236_R3608
167.1
RHH5265_R3637
64.6
RHH5208_R3579
102.9
Memory CD4 T-cell Th1 nTPM: 100.3
Samples: 4
Max nTPM: 148.9
Min nTPM: 70.6
RHH5210_R3581
83.1
RHH5302_R3668
148.9
RHH5238_R3610
98.7
RHH5267_R3639
70.6
Memory CD4 T-cell Th1/Th17 nTPM: 114.5
Samples: 4
Max nTPM: 177.2
Min nTPM: 50.4
RHH5303_R3669
145.2
RHH5211_R3582
177.2
RHH5239_R3611
50.4
RHH5268_R3640
85.3
Memory CD4 T-cell Th17 nTPM: 83.9
Samples: 4
Max nTPM: 142.3
Min nTPM: 59.9
RHH5304_R3670
70.3
RHH5212_R3583
142.3
RHH5240_R3612
63.1
RHH5269_R3641
59.9
Memory CD4 T-cell Th2 nTPM: 85.3
Samples: 4
Max nTPM: 97.3
Min nTPM: 67.1
RHH5305_R3671
81.5
RHH5213_R3584
97.3
RHH5241_R3613
95.1
RHH5270_R3642
67.1
Naive CD4 T-cell nTPM: 76.4
Samples: 4
Max nTPM: 135.7
Min nTPM: 48.0
RHH5306_R3672
66.9
RHH5214_R3585
135.7
RHH5242_R3614
55.1
RHH5271_R3643
48.0
Naive CD8 T-cell nTPM: 60.6
Samples: 4
Max nTPM: 75.3
Min nTPM: 46.5
RHH5201_R3572
75.3
RHH5229_R3601
46.5
RHH5258_R3630
67.8
RHH5287_R3659
52.6
Non-Vd2 gdTCR nTPM: 102.8
Samples: 4
Max nTPM: 146.2
Min nTPM: 62.5
RHH5235_R3607
62.5
RHH5264_R3636
104.2
RHH5207_R3578
98.1
RHH5299_R3665
146.2
T-reg nTPM: 90.7
Samples: 4
Max nTPM: 110.0
Min nTPM: 53.8
RHH5301_R3667
104.7
RHH5237_R3609
110.0
RHH5266_R3638
53.8
RHH5209_R3580
94.1
Terminal effector memory CD4 T-cell nTPM: 71.5
Samples: 2
Max nTPM: 83.0
Min nTPM: 60.0
RHH5243_R3615
60.0
RHH5272_R3644
83.0
Terminal effector memory CD8 T-cell nTPM: 146.1
Samples: 4
Max nTPM: 325.2
Min nTPM: 71.4
RHH5232_R3604
71.4
RHH5204_R3575
325.2
RHH5261_R3633
84.2
RHH5296_R3662
103.6
Vd2 gdTCR nTPM: 156.8
Samples: 4
Max nTPM: 267.4
Min nTPM: 95.9
RHH5234_R3606
99.5
RHH5206_R3577
267.4
RHH5263_R3635
95.9
RHH5298_R3664
164.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
