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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
31.3
nTPM
Monaco:
124.1
nTPM
Schmiedel:
72.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
31.3
HPA sample
nTPM
gdT-cell nTPM: 19.9
Samples: 6
Max nTPM: 23.1
Min nTPM: 13.6
P10809_1007
20.0
P10809_1022
23.1
P10809_1041
22.2
P10809_1060
17.9
P10809_1077
13.6
P10809_1098
22.3
MAIT T-cell nTPM: 21.5
Samples: 6
Max nTPM: 30.1
Min nTPM: 13.8
P10809_1006
22.8
P10809_1024
24.9
P10809_1043
30.1
P10809_1062
13.8
P10809_1083
17.0
P10809_1097
20.4
Memory CD4 T-cell nTPM: 21.3
Samples: 6
Max nTPM: 26.1
Min nTPM: 11.8
P10809_1014
26.1
P10809_1026
20.6
P10809_1045
24.8
P10809_1064
11.8
P10809_1086
22.0
P10809_1113
22.3
Memory CD8 T-cell nTPM: 23.3
Samples: 5
Max nTPM: 32.0
Min nTPM: 16.1
P10809_1012
32.0
P10809_1027
21.9
P10809_1046
22.6
P10809_1065
16.1
P10809_1111
23.7
Naive CD4 T-cell nTPM: 19.1
Samples: 6
Max nTPM: 24.3
Min nTPM: 13.3
P10809_1015
23.3
P10809_1030
24.3
P10809_1049
24.0
P10809_1068
14.1
P10809_1085
13.3
P10809_1112
15.4
Naive CD8 T-cell nTPM: 20.0
Samples: 6
Max nTPM: 25.3
Min nTPM: 16.5
P10809_1016
19.6
P10809_1031
22.3
P10809_1050
17.2
P10809_1069
25.3
P10809_1087
19.3
P10809_1110
16.5
T-reg nTPM: 31.3
Samples: 6
Max nTPM: 48.5
Min nTPM: 20.1
P10809_1018
35.5
P10809_1037
29.2
P10809_1056
48.5
P10809_1075
27.9
P10809_1094
20.1
P10809_1106
26.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
124.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 63.4
Samples: 4
Max nTPM: 75.5
Min nTPM: 53.3
RHH5202_R3573
71.3
RHH5230_R3602
53.3
RHH5259_R3631
53.5
RHH5288_R3660
75.5
Effector memory CD8 T-cell nTPM: 86.0
Samples: 4
Max nTPM: 97.5
Min nTPM: 68.1
RHH5203_R3574
94.5
RHH5231_R3603
97.5
RHH5260_R3632
68.1
RHH5289_R3661
83.8
MAIT T-cell nTPM: 93.8
Samples: 4
Max nTPM: 108.3
Min nTPM: 71.7
RHH5233_R3605
100.1
RHH5205_R3576
95.1
RHH5262_R3634
108.3
RHH5297_R3663
71.7
Memory CD4 T-cell TFH nTPM: 85.4
Samples: 4
Max nTPM: 106.5
Min nTPM: 57.4
RHH5300_R3666
98.5
RHH5236_R3608
106.5
RHH5265_R3637
79.3
RHH5208_R3579
57.4
Memory CD4 T-cell Th1 nTPM: 78.2
Samples: 4
Max nTPM: 125.1
Min nTPM: 31.8
RHH5210_R3581
92.9
RHH5302_R3668
125.1
RHH5238_R3610
31.8
RHH5267_R3639
62.9
Memory CD4 T-cell Th1/Th17 nTPM: 81.6
Samples: 4
Max nTPM: 101.7
Min nTPM: 42.4
RHH5303_R3669
91.6
RHH5211_R3582
101.7
RHH5239_R3611
42.4
RHH5268_R3640
90.7
Memory CD4 T-cell Th17 nTPM: 78.9
Samples: 4
Max nTPM: 91.1
Min nTPM: 62.1
RHH5304_R3670
91.1
RHH5212_R3583
62.1
RHH5240_R3612
76.9
RHH5269_R3641
85.3
Memory CD4 T-cell Th2 nTPM: 124.2
Samples: 4
Max nTPM: 161.0
Min nTPM: 108.6
RHH5305_R3671
108.6
RHH5213_R3584
161.0
RHH5241_R3613
109.6
RHH5270_R3642
117.5
Naive CD4 T-cell nTPM: 71.9
Samples: 4
Max nTPM: 83.7
Min nTPM: 58.5
RHH5306_R3672
76.1
RHH5214_R3585
83.7
RHH5242_R3614
58.5
RHH5271_R3643
69.2
Naive CD8 T-cell nTPM: 76.0
Samples: 4
Max nTPM: 94.9
Min nTPM: 48.4
RHH5201_R3572
79.7
RHH5229_R3601
48.4
RHH5258_R3630
81.1
RHH5287_R3659
94.9
Non-Vd2 gdTCR nTPM: 92.2
Samples: 4
Max nTPM: 105.1
Min nTPM: 78.2
RHH5235_R3607
78.2
RHH5264_R3636
94.3
RHH5207_R3578
105.1
RHH5299_R3665
91.2
T-reg nTPM: 87.1
Samples: 4
Max nTPM: 115.5
Min nTPM: 72.4
RHH5301_R3667
79.4
RHH5237_R3609
115.5
RHH5266_R3638
72.4
RHH5209_R3580
80.9
Terminal effector memory CD4 T-cell nTPM: 94.9
Samples: 2
Max nTPM: 124.1
Min nTPM: 65.6
RHH5243_R3615
65.6
RHH5272_R3644
124.1
Terminal effector memory CD8 T-cell nTPM: 86.4
Samples: 4
Max nTPM: 113.8
Min nTPM: 74.2
RHH5232_R3604
113.8
RHH5204_R3575
74.2
RHH5261_R3633
75.7
RHH5296_R3662
81.7
Vd2 gdTCR nTPM: 105.5
Samples: 4
Max nTPM: 120.3
Min nTPM: 95.2
RHH5234_R3606
97.4
RHH5206_R3577
95.2
RHH5263_R3635
120.3
RHH5298_R3664
108.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
