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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
18.2
nTPM
Monaco:
98.0
nTPM
Schmiedel:
97.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.2
HPA sample
nTPM
gdT-cell nTPM: 16.8
Samples: 6
Max nTPM: 19.9
Min nTPM: 12.0
P10809_1007
15.0
P10809_1022
18.1
P10809_1041
19.9
P10809_1060
12.0
P10809_1077
16.1
P10809_1098
19.9
MAIT T-cell nTPM: 17.5
Samples: 6
Max nTPM: 25.4
Min nTPM: 10.0
P10809_1006
20.1
P10809_1024
25.4
P10809_1043
19.5
P10809_1062
14.6
P10809_1083
15.5
P10809_1097
10.0
Memory CD4 T-cell nTPM: 17.4
Samples: 6
Max nTPM: 22.5
Min nTPM: 10.4
P10809_1014
17.0
P10809_1026
15.4
P10809_1045
22.5
P10809_1064
10.4
P10809_1086
17.1
P10809_1113
22.1
Memory CD8 T-cell nTPM: 15.9
Samples: 5
Max nTPM: 17.8
Min nTPM: 14.1
P10809_1012
17.8
P10809_1027
14.1
P10809_1046
16.0
P10809_1065
16.7
P10809_1111
15.1
Naive CD4 T-cell nTPM: 14.6
Samples: 6
Max nTPM: 17.3
Min nTPM: 10.4
P10809_1015
15.4
P10809_1030
15.9
P10809_1049
10.4
P10809_1068
13.3
P10809_1085
15.0
P10809_1112
17.3
Naive CD8 T-cell nTPM: 15.5
Samples: 6
Max nTPM: 20.1
Min nTPM: 11.8
P10809_1016
17.8
P10809_1031
15.1
P10809_1050
11.8
P10809_1069
15.8
P10809_1087
12.1
P10809_1110
20.1
T-reg nTPM: 18.3
Samples: 6
Max nTPM: 22.2
Min nTPM: 11.6
P10809_1018
19.4
P10809_1037
22.2
P10809_1056
11.6
P10809_1075
15.7
P10809_1094
19.4
P10809_1106
21.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 77.3
Samples: 4
Max nTPM: 100.7
Min nTPM: 61.2
RHH5202_R3573
76.5
RHH5230_R3602
100.7
RHH5259_R3631
61.2
RHH5288_R3660
70.9
Effector memory CD8 T-cell nTPM: 71.9
Samples: 4
Max nTPM: 86.1
Min nTPM: 61.6
RHH5203_R3574
86.1
RHH5231_R3603
74.3
RHH5260_R3632
61.6
RHH5289_R3661
65.4
MAIT T-cell nTPM: 79.2
Samples: 4
Max nTPM: 97.4
Min nTPM: 60.9
RHH5233_R3605
60.9
RHH5205_R3576
97.4
RHH5262_R3634
89.1
RHH5297_R3663
69.3
Memory CD4 T-cell TFH nTPM: 96.6
Samples: 4
Max nTPM: 111.8
Min nTPM: 76.0
RHH5300_R3666
98.1
RHH5236_R3608
76.0
RHH5265_R3637
100.6
RHH5208_R3579
111.8
Memory CD4 T-cell Th1 nTPM: 85.5
Samples: 4
Max nTPM: 97.4
Min nTPM: 74.7
RHH5210_R3581
84.5
RHH5302_R3668
74.7
RHH5238_R3610
97.4
RHH5267_R3639
85.4
Memory CD4 T-cell Th1/Th17 nTPM: 93.0
Samples: 4
Max nTPM: 125.4
Min nTPM: 75.1
RHH5303_R3669
75.1
RHH5211_R3582
88.3
RHH5239_R3611
125.4
RHH5268_R3640
83.0
Memory CD4 T-cell Th17 nTPM: 98.0
Samples: 4
Max nTPM: 105.7
Min nTPM: 83.0
RHH5304_R3670
102.9
RHH5212_R3583
83.0
RHH5240_R3612
105.7
RHH5269_R3641
100.3
Memory CD4 T-cell Th2 nTPM: 94.6
Samples: 4
Max nTPM: 112.2
Min nTPM: 79.5
RHH5305_R3671
92.5
RHH5213_R3584
112.2
RHH5241_R3613
94.3
RHH5270_R3642
79.5
Naive CD4 T-cell nTPM: 77.8
Samples: 4
Max nTPM: 86.9
Min nTPM: 55.5
RHH5306_R3672
83.4
RHH5214_R3585
55.5
RHH5242_R3614
86.9
RHH5271_R3643
85.3
Naive CD8 T-cell nTPM: 71.6
Samples: 4
Max nTPM: 105.5
Min nTPM: 45.0
RHH5201_R3572
105.5
RHH5229_R3601
72.8
RHH5258_R3630
45.0
RHH5287_R3659
63.1
Non-Vd2 gdTCR nTPM: 90.3
Samples: 4
Max nTPM: 107.5
Min nTPM: 69.9
RHH5235_R3607
107.5
RHH5264_R3636
69.9
RHH5207_R3578
95.4
RHH5299_R3665
88.5
T-reg nTPM: 73.6
Samples: 4
Max nTPM: 85.4
Min nTPM: 51.2
RHH5301_R3667
76.6
RHH5237_R3609
51.2
RHH5266_R3638
85.4
RHH5209_R3580
81.2
Terminal effector memory CD4 T-cell nTPM: 79.8
Samples: 2
Max nTPM: 82.2
Min nTPM: 77.4
RHH5243_R3615
77.4
RHH5272_R3644
82.2
Terminal effector memory CD8 T-cell nTPM: 68.3
Samples: 4
Max nTPM: 75.7
Min nTPM: 59.2
RHH5232_R3604
75.7
RHH5204_R3575
74.8
RHH5261_R3633
63.6
RHH5296_R3662
59.2
Vd2 gdTCR nTPM: 70.0
Samples: 4
Max nTPM: 85.5
Min nTPM: 57.9
RHH5234_R3606
63.6
RHH5206_R3577
85.5
RHH5263_R3635
73.0
RHH5298_R3664
57.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
