HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:28.7 nTPM
HPA Brain:53.6 nTPM
GTEx:28.7 nTPM
FANTOM5:12.4 Scaled Tags Per Million
Pig:28.6 nTPM
Mouse:46.8 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060928
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.6
Sample id Sample description nTPM
Hippocampus
nTPM: 51.4
2621 Female, age 67, right hemisphere 68.7
2148 Female, age 91, left hemisphere 60.8
1898 Male, age 80, left hemisphere 47.6
2529 Female, age 94, left hemisphere 46.6
1911 Female, age 85, right hemisphere 46.0
1855 Male, age 76, left hemisphere 38.6
Dentate gyrus
nTPM: 46.4
1927 Female, age 91, both hemispheres 67.6
2531 Female, age 67, both hemispheres 56.2
2530 Female, age 94, left hemisphere 46.5
2528 Male, age 74, both hemispheres 37.7
2246 Female, age 85, both hemispheres 36.7
2010 Male, age 76, both hemispheres 33.5
Entorhinal gyrus
nTPM: 48.1
2613 Female, age 94, left hemisphere 63.4
2686 Male, age 75, right hemisphere 58.5
2764 Male, age 80, right hemisphere 48.2
1938 Female, age 85, left hemisphere 41.9
2117 Female, age 91, right hemisphere 38.3
1787 Male, age 76, left hemisphere 38.0
Hippocampus, CA1
nTPM: 52.5
2749 Male, age 80, left hemisphere 72.7
2527 Male, age 74, both hemispheres 57.4
2082 Female, age 91, right hemisphere 49.8
1873 Female, age 85, both hemispheres 47.2
2045 Male, age 76, both hemispheres 35.4
Hippocampus, CA2
nTPM: 46.3
1963 Male, age 80, left hemisphere 74.5
2113 Female, age 91, right hemisphere 60.9
2437 Female, age 94, left hemisphere 44.0
1892 Male, age 76, both hemispheres 37.1
2249 Male, age 74, both hemispheres 35.7
1940 Female, age 85, left hemisphere 25.8
Hippocampus, CA3
nTPM: 53.6
2137 Male, age 80, left hemisphere 81.1
2861 Female, age 67, both hemispheres 75.7
2620 Female, age 94, left hemisphere 53.9
2436 Male, age 74, both hemispheres 43.0
1867 Male, age 76, both hemispheres 35.3
1891 Female, age 85, both hemispheres 32.7
Parahippocampal cortex
nTPM: 46.6
2245 Female, age 91, both hemispheres 79.7
2622 Female, age 67, right hemisphere 51.3
2693 Female, age 94, both hemispheres 50.6
1850 Male, age 80, both hemispheres 45.9
1933 Female, age 85, both hemispheres 45.0
2250 Female, age 67, right hemisphere 43.8
1990 Female, age 91, right hemisphere 42.4
2018 Male, age 76, both hemispheres 39.3
2532 Female, age 72, left hemisphere 36.9
2692 Male, age 74, both hemispheres 31.1
Perirhinal gyrus
nTPM: 50.7
1847 Female, age 91, left hemisphere 64.8
1794 Male, age 80, right hemisphere 54.7
2521 Female, age 94, right hemisphere 48.6
2848 Male, age 76, right hemisphere 43.3
1841 Female, age 85, right hemisphere 42.3
Subiculum
nTPM: 50.2
2438 Female, age 94, left hemisphere 126.1
2729 Female, age 91, right hemisphere 41.8
1901 Male, age 80, both hemispheres 41.5
1977 Female, age 85, both hemispheres 32.0
2042 Male, age 76, both hemispheres 31.9
2619 Male, age 74, both hemispheres 28.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.7
Samples: 197

Max nTPM: 96.8
Min nTPM: 0.4
Std nTPM: 17.0
Median nTPM: 27.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 96.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 82.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 80.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 74.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 68.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 68.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 65.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 62.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 61.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 61.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 60.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.4
FF:10153-102I9 76 years, female 17.6
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.6
Pig sample Sample description nTPM
Subiculum
nTPM: 19.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 15.0
Sample A Female 25.5
Sample B Female 18.6
Sample C Male 17.4
Sample D Male 15.0
Dorsal hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 20.2
Min nTPM: 12.9
Sample A Female 18.7
Sample B Female 20.2
Sample C Male 13.8
Sample D Male 12.9
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 32.1
Min nTPM: 26.5
Sample A Female 26.5
Sample B Female 32.1
Sample C Male 28.4
Sample D Male 27.5
Ventral hippocampus
nTPM: 20.2
Samples: 4

Max nTPM: 27.1
Min nTPM: 16.1
Sample A Female 18.2
Sample B Female 16.1
Sample C Male 27.1
Sample D Male 19.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.7
Samples: 4

Max nTPM: 51.4
Min nTPM: 40.9
Sample A Male 44.7
Sample B Male 49.9
Sample C Female 40.9
Sample D Female 51.4
Hippocampal formation
nTPM: 22.2
Samples: 4

Max nTPM: 26.1
Min nTPM: 19.2
Sample A Male 26.1
Sample B Male 20.0
Sample C Female 19.2
Sample D Female 23.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71020888 Antisense, RP_050510_04_F02, Mouse strain C57BL/6J (56 days, male) 0.4

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