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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
38.9
nTPM
Monaco:
112.2
nTPM
Schmiedel:
64.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
38.9
HPA sample
nTPM
gdT-cell nTPM: 29.5
Samples: 6
Max nTPM: 37.0
Min nTPM: 21.5
P10809_1007
21.5
P10809_1022
35.9
P10809_1041
30.0
P10809_1060
37.0
P10809_1077
27.1
P10809_1098
25.2
MAIT T-cell nTPM: 36.9
Samples: 6
Max nTPM: 50.2
Min nTPM: 26.2
P10809_1006
38.1
P10809_1024
50.2
P10809_1043
35.7
P10809_1062
36.6
P10809_1083
26.2
P10809_1097
34.5
Memory CD4 T-cell nTPM: 32.5
Samples: 6
Max nTPM: 37.3
Min nTPM: 22.9
P10809_1014
32.8
P10809_1026
37.3
P10809_1045
37.2
P10809_1064
22.9
P10809_1086
30.0
P10809_1113
34.5
Memory CD8 T-cell nTPM: 34.2
Samples: 5
Max nTPM: 54.6
Min nTPM: 26.3
P10809_1012
29.8
P10809_1027
54.6
P10809_1046
33.0
P10809_1065
26.3
P10809_1111
27.5
Naive CD4 T-cell nTPM: 32.5
Samples: 6
Max nTPM: 37.5
Min nTPM: 28.0
P10809_1015
28.0
P10809_1030
34.6
P10809_1049
30.8
P10809_1068
33.5
P10809_1085
30.4
P10809_1112
37.5
Naive CD8 T-cell nTPM: 29.9
Samples: 6
Max nTPM: 34.7
Min nTPM: 25.8
P10809_1016
31.4
P10809_1031
34.7
P10809_1050
25.9
P10809_1069
31.1
P10809_1087
25.8
P10809_1110
30.3
T-reg nTPM: 38.9
Samples: 6
Max nTPM: 56.8
Min nTPM: 19.7
P10809_1018
41.7
P10809_1037
19.7
P10809_1056
41.2
P10809_1075
29.8
P10809_1094
56.8
P10809_1106
44.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
112.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 86.6
Samples: 4
Max nTPM: 92.9
Min nTPM: 81.7
RHH5202_R3573
81.7
RHH5230_R3602
86.3
RHH5259_R3631
92.9
RHH5288_R3660
85.3
Effector memory CD8 T-cell nTPM: 109.3
Samples: 4
Max nTPM: 131.4
Min nTPM: 93.2
RHH5203_R3574
93.2
RHH5231_R3603
99.2
RHH5260_R3632
131.4
RHH5289_R3661
113.3
MAIT T-cell nTPM: 102.5
Samples: 4
Max nTPM: 116.8
Min nTPM: 81.3
RHH5233_R3605
116.8
RHH5205_R3576
110.1
RHH5262_R3634
101.9
RHH5297_R3663
81.3
Memory CD4 T-cell TFH nTPM: 89.2
Samples: 4
Max nTPM: 112.7
Min nTPM: 71.7
RHH5300_R3666
71.7
RHH5236_R3608
81.8
RHH5265_R3637
90.7
RHH5208_R3579
112.7
Memory CD4 T-cell Th1 nTPM: 90.5
Samples: 4
Max nTPM: 110.4
Min nTPM: 72.6
RHH5210_R3581
95.5
RHH5302_R3668
83.6
RHH5238_R3610
72.6
RHH5267_R3639
110.4
Memory CD4 T-cell Th1/Th17 nTPM: 96.1
Samples: 4
Max nTPM: 113.7
Min nTPM: 76.1
RHH5303_R3669
98.0
RHH5211_R3582
96.6
RHH5239_R3611
113.7
RHH5268_R3640
76.1
Memory CD4 T-cell Th17 nTPM: 112.3
Samples: 4
Max nTPM: 130.6
Min nTPM: 96.6
RHH5304_R3670
124.4
RHH5212_R3583
97.4
RHH5240_R3612
130.6
RHH5269_R3641
96.6
Memory CD4 T-cell Th2 nTPM: 93.8
Samples: 4
Max nTPM: 111.0
Min nTPM: 80.7
RHH5305_R3671
92.9
RHH5213_R3584
111.0
RHH5241_R3613
80.7
RHH5270_R3642
90.6
Naive CD4 T-cell nTPM: 96.9
Samples: 4
Max nTPM: 106.3
Min nTPM: 85.7
RHH5306_R3672
85.7
RHH5214_R3585
100.1
RHH5242_R3614
95.6
RHH5271_R3643
106.3
Naive CD8 T-cell nTPM: 82.2
Samples: 4
Max nTPM: 90.3
Min nTPM: 76.0
RHH5201_R3572
90.3
RHH5229_R3601
76.0
RHH5258_R3630
78.0
RHH5287_R3659
84.6
Non-Vd2 gdTCR nTPM: 100.7
Samples: 4
Max nTPM: 114.3
Min nTPM: 86.4
RHH5235_R3607
114.3
RHH5264_R3636
104.0
RHH5207_R3578
98.0
RHH5299_R3665
86.4
T-reg nTPM: 94.8
Samples: 4
Max nTPM: 129.1
Min nTPM: 74.0
RHH5301_R3667
86.0
RHH5237_R3609
129.1
RHH5266_R3638
74.0
RHH5209_R3580
90.0
Terminal effector memory CD4 T-cell nTPM: 104.2
Samples: 2
Max nTPM: 109.4
Min nTPM: 98.9
RHH5243_R3615
109.4
RHH5272_R3644
98.9
Terminal effector memory CD8 T-cell nTPM: 94.8
Samples: 4
Max nTPM: 117.4
Min nTPM: 72.5
RHH5232_R3604
117.4
RHH5204_R3575
72.5
RHH5261_R3633
97.1
RHH5296_R3662
92.0
Vd2 gdTCR nTPM: 102.3
Samples: 4
Max nTPM: 125.6
Min nTPM: 77.3
RHH5234_R3606
88.3
RHH5206_R3577
125.6
RHH5263_R3635
117.8
RHH5298_R3664
77.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
