HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:32.2 nTPM
HPA Brain:47.6 nTPM
GTEx:32.2 nTPM
FANTOM5:115.6 Scaled Tags Per Million
Pig:23.2 nTPM
Mouse:38.8 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047106
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.6
Sample id Sample description nTPM
Hippocampus
nTPM: 43.1
2529 Female, age 94, left hemisphere 49.9
1898 Male, age 80, left hemisphere 45.9
2621 Female, age 67, right hemisphere 42.3
2148 Female, age 91, left hemisphere 42.2
1911 Female, age 85, right hemisphere 40.5
1855 Male, age 76, left hemisphere 37.7
Dentate gyrus
nTPM: 41.9
2010 Male, age 76, both hemispheres 45.3
2528 Male, age 74, both hemispheres 44.6
2530 Female, age 94, left hemisphere 43.3
2246 Female, age 85, both hemispheres 40.8
1927 Female, age 91, both hemispheres 39.5
2531 Female, age 67, both hemispheres 38.2
Entorhinal gyrus
nTPM: 47.6
2764 Male, age 80, right hemisphere 54.9
2117 Female, age 91, right hemisphere 49.9
1938 Female, age 85, left hemisphere 47.1
1787 Male, age 76, left hemisphere 46.6
2686 Male, age 75, right hemisphere 44.9
2613 Female, age 94, left hemisphere 42.1
Hippocampus, CA1
nTPM: 44.8
2749 Male, age 80, left hemisphere 51.8
2082 Female, age 91, right hemisphere 46.2
2527 Male, age 74, both hemispheres 46.1
1873 Female, age 85, both hemispheres 44.1
2045 Male, age 76, both hemispheres 35.7
Hippocampus, CA2
nTPM: 45.4
2113 Female, age 91, right hemisphere 47.5
1963 Male, age 80, left hemisphere 46.8
2249 Male, age 74, both hemispheres 46.8
1940 Female, age 85, left hemisphere 45.9
1892 Male, age 76, both hemispheres 43.0
2437 Female, age 94, left hemisphere 42.6
Hippocampus, CA3
nTPM: 42.4
2436 Male, age 74, both hemispheres 46.0
2137 Male, age 80, left hemisphere 45.5
1867 Male, age 76, both hemispheres 45.0
1891 Female, age 85, both hemispheres 41.8
2620 Female, age 94, left hemisphere 41.3
2861 Female, age 67, both hemispheres 34.6
Parahippocampal cortex
nTPM: 43.4
1850 Male, age 80, both hemispheres 48.0
1990 Female, age 91, right hemisphere 47.1
2532 Female, age 72, left hemisphere 46.6
1933 Female, age 85, both hemispheres 44.9
2018 Male, age 76, both hemispheres 43.9
2245 Female, age 91, both hemispheres 43.5
2692 Male, age 74, both hemispheres 42.5
2250 Female, age 67, right hemisphere 40.9
2622 Female, age 67, right hemisphere 40.8
2693 Female, age 94, both hemispheres 35.9
Perirhinal gyrus
nTPM: 46.0
1794 Male, age 80, right hemisphere 53.2
1841 Female, age 85, right hemisphere 47.4
1847 Female, age 91, left hemisphere 46.0
2521 Female, age 94, right hemisphere 41.7
2848 Male, age 76, right hemisphere 41.4
Subiculum
nTPM: 45.2
1977 Female, age 85, both hemispheres 47.3
2619 Male, age 74, both hemispheres 46.9
1901 Male, age 80, both hemispheres 46.5
2042 Male, age 76, both hemispheres 45.5
2438 Female, age 94, left hemisphere 44.6
2729 Female, age 91, right hemisphere 40.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.2
Samples: 197

Max nTPM: 61.9
Min nTPM: 18.8
Std nTPM: 5.6
Median nTPM: 31.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 61.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 50.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 46.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 46.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 45.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 44.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 44.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 44.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 44.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 43.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 42.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.6
FF:10169-103B7 60 years, female 118.3
FF:10153-102I9 76 years, female 112.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.2
Pig sample Sample description nTPM
Subiculum
nTPM: 21.3
Samples: 4

Max nTPM: 26.5
Min nTPM: 18.8
Sample A Female 26.5
Sample B Female 19.4
Sample C Male 20.4
Sample D Male 18.8
Dorsal hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 27.6
Min nTPM: 19.6
Sample A Female 27.6
Sample B Female 23.5
Sample C Male 22.0
Sample D Male 19.6
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 24.9
Min nTPM: 20.1
Sample A Female 24.9
Sample B Female 23.0
Sample C Male 21.7
Sample D Male 20.1
Ventral hippocampus
nTPM: 22.9
Samples: 4

Max nTPM: 27.9
Min nTPM: 17.7
Sample A Female 21.7
Sample B Female 17.7
Sample C Male 27.9
Sample D Male 24.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 41.8
Min nTPM: 33.9
Sample A Male 33.9
Sample B Male 36.8
Sample C Female 35.4
Sample D Female 41.8
Hippocampal formation
nTPM: 38.8
Samples: 4

Max nTPM: 41.0
Min nTPM: 37.3
Sample A Male 37.5
Sample B Male 41.0
Sample C Female 39.3
Sample D Female 37.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
67850946 Antisense, RP_041018_01_A05, Mouse strain C57BL/6J (56 days, male) 7.5
119683 Antisense, RP_040507_01_B10, Mouse strain C57BL/6J (56 days, male) 5.3

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