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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.0
nTPM
Monaco:
109.9
nTPM
Schmiedel:
167.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.0
HPA sample
nTPM
gdT-cell nTPM: 67.1
Samples: 6
Max nTPM: 95.8
Min nTPM: 50.7
P10809_1007
50.7
P10809_1022
85.3
P10809_1041
95.8
P10809_1060
59.7
P10809_1077
53.6
P10809_1098
57.6
MAIT T-cell nTPM: 93.4
Samples: 6
Max nTPM: 132.0
Min nTPM: 59.1
P10809_1006
80.7
P10809_1024
132.0
P10809_1043
123.4
P10809_1062
100.0
P10809_1083
65.4
P10809_1097
59.1
Memory CD4 T-cell nTPM: 82.6
Samples: 6
Max nTPM: 117.5
Min nTPM: 62.4
P10809_1014
69.9
P10809_1026
117.5
P10809_1045
110.5
P10809_1064
65.8
P10809_1086
62.4
P10809_1113
69.3
Memory CD8 T-cell nTPM: 72.6
Samples: 5
Max nTPM: 90.9
Min nTPM: 53.9
P10809_1012
72.9
P10809_1027
88.3
P10809_1046
90.9
P10809_1065
56.8
P10809_1111
53.9
Naive CD4 T-cell nTPM: 96.1
Samples: 6
Max nTPM: 127.4
Min nTPM: 68.6
P10809_1015
68.6
P10809_1030
119.5
P10809_1049
127.4
P10809_1068
93.2
P10809_1085
91.0
P10809_1112
76.7
Naive CD8 T-cell nTPM: 81.2
Samples: 6
Max nTPM: 131.3
Min nTPM: 53.1
P10809_1016
69.3
P10809_1031
131.3
P10809_1050
98.0
P10809_1069
67.3
P10809_1087
53.1
P10809_1110
68.0
T-reg nTPM: 79.9
Samples: 6
Max nTPM: 100.3
Min nTPM: 59.7
P10809_1018
80.2
P10809_1037
100.3
P10809_1056
91.4
P10809_1075
65.9
P10809_1094
82.0
P10809_1106
59.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
109.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 87.3
Samples: 4
Max nTPM: 108.6
Min nTPM: 75.2
RHH5202_R3573
89.3
RHH5230_R3602
76.1
RHH5259_R3631
108.6
RHH5288_R3660
75.2
Effector memory CD8 T-cell nTPM: 94.7
Samples: 4
Max nTPM: 107.7
Min nTPM: 74.1
RHH5203_R3574
93.1
RHH5231_R3603
74.1
RHH5260_R3632
103.7
RHH5289_R3661
107.7
MAIT T-cell nTPM: 89.3
Samples: 4
Max nTPM: 98.3
Min nTPM: 70.4
RHH5233_R3605
70.4
RHH5205_R3576
98.3
RHH5262_R3634
94.7
RHH5297_R3663
93.9
Memory CD4 T-cell TFH nTPM: 86.4
Samples: 4
Max nTPM: 95.6
Min nTPM: 73.1
RHH5300_R3666
73.1
RHH5236_R3608
95.6
RHH5265_R3637
84.6
RHH5208_R3579
92.4
Memory CD4 T-cell Th1 nTPM: 96.8
Samples: 4
Max nTPM: 106.6
Min nTPM: 81.5
RHH5210_R3581
106.6
RHH5302_R3668
81.5
RHH5238_R3610
102.4
RHH5267_R3639
96.8
Memory CD4 T-cell Th1/Th17 nTPM: 102.3
Samples: 4
Max nTPM: 107.3
Min nTPM: 94.0
RHH5303_R3669
106.4
RHH5211_R3582
107.3
RHH5239_R3611
101.3
RHH5268_R3640
94.0
Memory CD4 T-cell Th17 nTPM: 109.9
Samples: 4
Max nTPM: 123.3
Min nTPM: 98.1
RHH5304_R3670
103.6
RHH5212_R3583
114.6
RHH5240_R3612
123.3
RHH5269_R3641
98.1
Memory CD4 T-cell Th2 nTPM: 105.0
Samples: 4
Max nTPM: 117.7
Min nTPM: 96.4
RHH5305_R3671
96.4
RHH5213_R3584
117.7
RHH5241_R3613
108.6
RHH5270_R3642
97.1
Naive CD4 T-cell nTPM: 103.5
Samples: 4
Max nTPM: 113.0
Min nTPM: 96.6
RHH5306_R3672
104.6
RHH5214_R3585
113.0
RHH5242_R3614
96.6
RHH5271_R3643
99.8
Naive CD8 T-cell nTPM: 109.4
Samples: 4
Max nTPM: 125.7
Min nTPM: 93.9
RHH5201_R3572
108.3
RHH5229_R3601
125.7
RHH5258_R3630
93.9
RHH5287_R3659
109.6
Non-Vd2 gdTCR nTPM: 85.1
Samples: 4
Max nTPM: 96.5
Min nTPM: 74.6
RHH5235_R3607
93.0
RHH5264_R3636
96.5
RHH5207_R3578
74.6
RHH5299_R3665
76.2
T-reg nTPM: 102.0
Samples: 4
Max nTPM: 114.3
Min nTPM: 85.2
RHH5301_R3667
85.2
RHH5237_R3609
99.7
RHH5266_R3638
108.9
RHH5209_R3580
114.3
Terminal effector memory CD4 T-cell nTPM: 88.5
Samples: 2
Max nTPM: 94.2
Min nTPM: 82.8
RHH5243_R3615
82.8
RHH5272_R3644
94.2
Terminal effector memory CD8 T-cell nTPM: 94.3
Samples: 4
Max nTPM: 100.1
Min nTPM: 84.8
RHH5232_R3604
96.5
RHH5204_R3575
84.8
RHH5261_R3633
100.1
RHH5296_R3662
95.6
Vd2 gdTCR nTPM: 80.5
Samples: 4
Max nTPM: 87.8
Min nTPM: 70.9
RHH5234_R3606
87.8
RHH5206_R3577
80.6
RHH5263_R3635
82.7
RHH5298_R3664
70.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
