HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:120.1 nTPM
HPA Brain:102.0 nTPM
GTEx:120.1 nTPM
FANTOM5:98.5 Scaled Tags Per Million
Pig:142.5 nTPM
Mouse:201.6 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047266Antibody CAB046007Antibody CAB046008
Glial cells Not detectedNot detectedMedium
Neuronal cells Not detectedLowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 102.0
Sample id Sample description nTPM
Hippocampus
nTPM: 89.1
1898 Male, age 80, left hemisphere 111.0
2529 Female, age 94, left hemisphere 98.8
2621 Female, age 67, right hemisphere 84.8
1911 Female, age 85, right hemisphere 83.0
2148 Female, age 91, left hemisphere 81.5
1855 Male, age 76, left hemisphere 75.2
Dentate gyrus
nTPM: 89.2
2010 Male, age 76, both hemispheres 98.9
2528 Male, age 74, both hemispheres 93.8
1927 Female, age 91, both hemispheres 90.9
2530 Female, age 94, left hemisphere 88.5
2531 Female, age 67, both hemispheres 82.4
2246 Female, age 85, both hemispheres 80.6
Entorhinal gyrus
nTPM: 85.6
2764 Male, age 80, right hemisphere 98.1
1938 Female, age 85, left hemisphere 93.3
2117 Female, age 91, right hemisphere 89.9
1787 Male, age 76, left hemisphere 83.2
2686 Male, age 75, right hemisphere 75.5
2613 Female, age 94, left hemisphere 73.4
Hippocampus, CA1
nTPM: 102.0
2749 Male, age 80, left hemisphere 143.7
1873 Female, age 85, both hemispheres 96.6
2527 Male, age 74, both hemispheres 91.3
2082 Female, age 91, right hemisphere 90.5
2045 Male, age 76, both hemispheres 88.2
Hippocampus, CA2
nTPM: 93.9
1963 Male, age 80, left hemisphere 117.3
1892 Male, age 76, both hemispheres 100.7
2249 Male, age 74, both hemispheres 92.1
1940 Female, age 85, left hemisphere 90.2
2113 Female, age 91, right hemisphere 84.6
2437 Female, age 94, left hemisphere 78.7
Hippocampus, CA3
nTPM: 93.8
2137 Male, age 80, left hemisphere 113.1
1867 Male, age 76, both hemispheres 103.3
2436 Male, age 74, both hemispheres 96.1
2620 Female, age 94, left hemisphere 87.4
1891 Female, age 85, both hemispheres 84.4
2861 Female, age 67, both hemispheres 78.6
Parahippocampal cortex
nTPM: 83.7
2250 Female, age 67, right hemisphere 98.3
2018 Male, age 76, both hemispheres 94.5
1933 Female, age 85, both hemispheres 93.9
1990 Female, age 91, right hemisphere 89.8
2245 Female, age 91, both hemispheres 87.8
1850 Male, age 80, both hemispheres 87.0
2532 Female, age 72, left hemisphere 79.0
2693 Female, age 94, both hemispheres 73.9
2692 Male, age 74, both hemispheres 72.3
2622 Female, age 67, right hemisphere 60.7
Perirhinal gyrus
nTPM: 91.1
1847 Female, age 91, left hemisphere 104.8
1794 Male, age 80, right hemisphere 98.9
1841 Female, age 85, right hemisphere 89.8
2521 Female, age 94, right hemisphere 87.5
2848 Male, age 76, right hemisphere 74.6
Subiculum
nTPM: 86.9
1977 Female, age 85, both hemispheres 102.7
1901 Male, age 80, both hemispheres 101.5
2042 Male, age 76, both hemispheres 90.3
2729 Female, age 91, right hemisphere 80.7
2619 Male, age 74, both hemispheres 77.1
2438 Female, age 94, left hemisphere 69.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 120.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 120.1
Samples: 197

Max nTPM: 235.0
Min nTPM: 77.1
Std nTPM: 24.6
Median nTPM: 114.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 235.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 194.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 192.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 189.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 184.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 174.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 174.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 171.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 166.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 165.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 164.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.5
FF:10169-103B7 60 years, female 126.7
FF:10153-102I9 76 years, female 70.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 142.5
Pig sample Sample description nTPM
Subiculum
nTPM: 120.3
Samples: 4

Max nTPM: 178.2
Min nTPM: 96.1
Sample A Female 178.2
Sample B Female 103.8
Sample C Male 103.1
Sample D Male 96.1
Dorsal hippocampus
nTPM: 142.5
Samples: 4

Max nTPM: 204.2
Min nTPM: 105.4
Sample A Female 204.2
Sample B Female 125.7
Sample C Male 134.8
Sample D Male 105.4
Entorhinal cortex
nTPM: 115.6
Samples: 4

Max nTPM: 139.9
Min nTPM: 96.3
Sample A Female 139.9
Sample B Female 121.5
Sample C Male 104.8
Sample D Male 96.3
Ventral hippocampus
nTPM: 134.0
Samples: 4

Max nTPM: 159.5
Min nTPM: 90.1
Sample A Female 159.5
Sample B Female 90.1
Sample C Male 155.2
Sample D Male 131.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 201.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 177.8
Samples: 4

Max nTPM: 195.5
Min nTPM: 152.5
Sample A Male 170.4
Sample B Male 192.6
Sample C Female 195.5
Sample D Female 152.5
Hippocampal formation
nTPM: 201.6
Samples: 4

Max nTPM: 238.0
Min nTPM: 183.1
Sample A Male 238.0
Sample B Male 186.5
Sample C Female 183.1
Sample D Female 198.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
75198064 Antisense, RP_060502_01_F05, Mouse strain C57BL/6J (56 days, male) 1.5

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