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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
47.0
nTPM
Monaco:
93.3
nTPM
Schmiedel:
22.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.0
HPA sample
nTPM
gdT-cell nTPM: 41.6
Samples: 6
Max nTPM: 67.0
Min nTPM: 24.1
P10809_1007
24.1
P10809_1022
52.9
P10809_1041
67.0
P10809_1060
41.8
P10809_1077
25.2
P10809_1098
38.8
MAIT T-cell nTPM: 34.8
Samples: 6
Max nTPM: 41.9
Min nTPM: 28.7
P10809_1006
32.7
P10809_1024
41.9
P10809_1043
28.7
P10809_1062
39.1
P10809_1083
32.8
P10809_1097
33.6
Memory CD4 T-cell nTPM: 37.6
Samples: 6
Max nTPM: 47.6
Min nTPM: 27.3
P10809_1014
27.3
P10809_1026
47.6
P10809_1045
46.1
P10809_1064
30.9
P10809_1086
30.5
P10809_1113
43.2
Memory CD8 T-cell nTPM: 39.8
Samples: 5
Max nTPM: 46.7
Min nTPM: 29.5
P10809_1012
36.4
P10809_1027
46.3
P10809_1046
46.7
P10809_1065
39.9
P10809_1111
29.5
Naive CD4 T-cell nTPM: 47.0
Samples: 6
Max nTPM: 62.2
Min nTPM: 29.6
P10809_1015
29.6
P10809_1030
52.0
P10809_1049
62.2
P10809_1068
44.3
P10809_1085
36.1
P10809_1112
57.5
Naive CD8 T-cell nTPM: 41.6
Samples: 6
Max nTPM: 47.5
Min nTPM: 30.8
P10809_1016
35.5
P10809_1031
46.2
P10809_1050
43.9
P10809_1069
45.9
P10809_1087
30.8
P10809_1110
47.5
T-reg nTPM: 32.4
Samples: 6
Max nTPM: 49.3
Min nTPM: 22.2
P10809_1018
25.0
P10809_1037
32.5
P10809_1056
34.6
P10809_1075
22.2
P10809_1094
30.5
P10809_1106
49.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 73.8
Samples: 4
Max nTPM: 94.0
Min nTPM: 40.9
RHH5202_R3573
91.2
RHH5230_R3602
94.0
RHH5259_R3631
40.9
RHH5288_R3660
68.9
Effector memory CD8 T-cell nTPM: 79.7
Samples: 4
Max nTPM: 98.3
Min nTPM: 54.2
RHH5203_R3574
98.3
RHH5231_R3603
87.9
RHH5260_R3632
54.2
RHH5289_R3661
78.5
MAIT T-cell nTPM: 70.1
Samples: 4
Max nTPM: 79.9
Min nTPM: 59.2
RHH5233_R3605
59.2
RHH5205_R3576
79.9
RHH5262_R3634
74.7
RHH5297_R3663
66.4
Memory CD4 T-cell TFH nTPM: 93.3
Samples: 4
Max nTPM: 97.5
Min nTPM: 84.5
RHH5300_R3666
93.6
RHH5236_R3608
97.4
RHH5265_R3637
97.5
RHH5208_R3579
84.5
Memory CD4 T-cell Th1 nTPM: 73.4
Samples: 4
Max nTPM: 86.5
Min nTPM: 58.1
RHH5210_R3581
75.7
RHH5302_R3668
86.5
RHH5238_R3610
58.1
RHH5267_R3639
73.1
Memory CD4 T-cell Th1/Th17 nTPM: 65.8
Samples: 4
Max nTPM: 76.4
Min nTPM: 49.9
RHH5303_R3669
76.4
RHH5211_R3582
70.9
RHH5239_R3611
49.9
RHH5268_R3640
66.1
Memory CD4 T-cell Th17 nTPM: 76.0
Samples: 4
Max nTPM: 89.0
Min nTPM: 65.5
RHH5304_R3670
75.7
RHH5212_R3583
89.0
RHH5240_R3612
73.6
RHH5269_R3641
65.5
Memory CD4 T-cell Th2 nTPM: 83.2
Samples: 4
Max nTPM: 97.3
Min nTPM: 72.9
RHH5305_R3671
72.9
RHH5213_R3584
88.2
RHH5241_R3613
97.3
RHH5270_R3642
74.3
Naive CD4 T-cell nTPM: 90.0
Samples: 4
Max nTPM: 94.4
Min nTPM: 85.4
RHH5306_R3672
86.5
RHH5214_R3585
93.5
RHH5242_R3614
94.4
RHH5271_R3643
85.4
Naive CD8 T-cell nTPM: 75.5
Samples: 4
Max nTPM: 95.6
Min nTPM: 41.9
RHH5201_R3572
95.6
RHH5229_R3601
41.9
RHH5258_R3630
85.0
RHH5287_R3659
79.5
Non-Vd2 gdTCR nTPM: 74.3
Samples: 4
Max nTPM: 88.4
Min nTPM: 53.5
RHH5235_R3607
53.5
RHH5264_R3636
88.4
RHH5207_R3578
73.8
RHH5299_R3665
81.3
T-reg nTPM: 66.8
Samples: 4
Max nTPM: 73.1
Min nTPM: 60.4
RHH5301_R3667
73.1
RHH5237_R3609
69.3
RHH5266_R3638
60.4
RHH5209_R3580
64.5
Terminal effector memory CD4 T-cell nTPM: 55.7
Samples: 2
Max nTPM: 57.1
Min nTPM: 54.2
RHH5243_R3615
57.1
RHH5272_R3644
54.2
Terminal effector memory CD8 T-cell nTPM: 59.4
Samples: 4
Max nTPM: 70.9
Min nTPM: 54.5
RHH5232_R3604
55.4
RHH5204_R3575
54.5
RHH5261_R3633
56.6
RHH5296_R3662
70.9
Vd2 gdTCR nTPM: 78.3
Samples: 4
Max nTPM: 84.8
Min nTPM: 69.3
RHH5234_R3606
74.8
RHH5206_R3577
84.8
RHH5263_R3635
69.3
RHH5298_R3664
84.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
