HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:4.5 nTPM
HPA Brain:8.2 nTPM
GTEx:4.5 nTPM
FANTOM5:19.5 Scaled Tags Per Million
Pig:26.9 nTPM
Mouse:50.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051184
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.2
Sample id Sample description nTPM
Hippocampus
nTPM: 6.8
1898 Male, age 80, left hemisphere 8.5
2148 Female, age 91, left hemisphere 7.0
2621 Female, age 67, right hemisphere 6.9
1855 Male, age 76, left hemisphere 6.5
1911 Female, age 85, right hemisphere 6.4
2529 Female, age 94, left hemisphere 5.6
Dentate gyrus
nTPM: 7.3
1927 Female, age 91, both hemispheres 8.3
2010 Male, age 76, both hemispheres 7.3
2528 Male, age 74, both hemispheres 7.3
2246 Female, age 85, both hemispheres 7.2
2530 Female, age 94, left hemisphere 6.9
2531 Female, age 67, both hemispheres 6.9
Entorhinal gyrus
nTPM: 6.6
2764 Male, age 80, right hemisphere 8.5
1938 Female, age 85, left hemisphere 6.8
1787 Male, age 76, left hemisphere 6.4
2686 Male, age 75, right hemisphere 6.4
2117 Female, age 91, right hemisphere 5.8
2613 Female, age 94, left hemisphere 5.4
Hippocampus, CA1
nTPM: 8.2
2749 Male, age 80, left hemisphere 11.6
1873 Female, age 85, both hemispheres 8.1
2045 Male, age 76, both hemispheres 7.4
2082 Female, age 91, right hemisphere 7.3
2527 Male, age 74, both hemispheres 6.5
Hippocampus, CA2
nTPM: 7.2
1963 Male, age 80, left hemisphere 9.3
1892 Male, age 76, both hemispheres 8.0
2113 Female, age 91, right hemisphere 6.9
2249 Male, age 74, both hemispheres 6.9
2437 Female, age 94, left hemisphere 6.5
1940 Female, age 85, left hemisphere 5.4
Hippocampus, CA3
nTPM: 7.7
1867 Male, age 76, both hemispheres 9.1
2137 Male, age 80, left hemisphere 9.1
2620 Female, age 94, left hemisphere 8.1
2436 Male, age 74, both hemispheres 7.0
2861 Female, age 67, both hemispheres 6.6
1891 Female, age 85, both hemispheres 6.3
Parahippocampal cortex
nTPM: 7.4
2532 Female, age 72, left hemisphere 8.5
2250 Female, age 67, right hemisphere 8.0
1990 Female, age 91, right hemisphere 7.8
2693 Female, age 94, both hemispheres 7.8
1850 Male, age 80, both hemispheres 7.6
2018 Male, age 76, both hemispheres 7.4
1933 Female, age 85, both hemispheres 7.1
2692 Male, age 74, both hemispheres 6.8
2245 Female, age 91, both hemispheres 6.7
2622 Female, age 67, right hemisphere 6.1
Perirhinal gyrus
nTPM: 7.9
1794 Male, age 80, right hemisphere 9.1
1847 Female, age 91, left hemisphere 8.1
1841 Female, age 85, right hemisphere 7.7
2848 Male, age 76, right hemisphere 7.4
2521 Female, age 94, right hemisphere 7.2
Subiculum
nTPM: 6.6
1901 Male, age 80, both hemispheres 7.6
1977 Female, age 85, both hemispheres 7.6
2729 Female, age 91, right hemisphere 7.2
2619 Male, age 74, both hemispheres 5.9
2042 Male, age 76, both hemispheres 5.7
2438 Female, age 94, left hemisphere 5.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.5
Samples: 197

Max nTPM: 15.3
Min nTPM: 0.8
Std nTPM: 1.9
Median nTPM: 4.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 15.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 9.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 9.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 8.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 8.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 8.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 8.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 8.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 8.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 8.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 8.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.5
FF:10153-102I9 76 years, female 21.3
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.9
Pig sample Sample description nTPM
Subiculum
nTPM: 25.1
Samples: 4

Max nTPM: 31.2
Min nTPM: 14.6
Sample A Female 14.6
Sample B Female 26.7
Sample C Male 27.9
Sample D Male 31.2
Dorsal hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 31.1
Min nTPM: 13.7
Sample A Female 13.7
Sample B Female 22.9
Sample C Male 22.2
Sample D Male 31.1
Entorhinal cortex
nTPM: 26.9
Samples: 4

Max nTPM: 36.0
Min nTPM: 21.7
Sample A Female 25.8
Sample B Female 21.7
Sample C Male 24.1
Sample D Male 36.0
Ventral hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 32.2
Min nTPM: 17.6
Sample A Female 25.8
Sample B Female 32.2
Sample C Male 17.6
Sample D Male 22.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.9
Samples: 4

Max nTPM: 53.1
Min nTPM: 42.1
Sample A Male 47.6
Sample B Male 53.1
Sample C Female 52.8
Sample D Female 42.1
Hippocampal formation
nTPM: 50.0
Samples: 4

Max nTPM: 59.0
Min nTPM: 43.7
Sample A Male 59.0
Sample B Male 48.6
Sample C Female 43.7
Sample D Female 48.6

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