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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
13.7
nTPM
Monaco:
26.1
nTPM
Schmiedel:
10.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
13.7
HPA sample
nTPM
gdT-cell nTPM: 12.0
Samples: 6
Max nTPM: 16.8
Min nTPM: 5.8
P10809_1007
10.4
P10809_1022
11.5
P10809_1041
16.8
P10809_1060
5.8
P10809_1077
14.4
P10809_1098
13.0
MAIT T-cell nTPM: 8.5
Samples: 6
Max nTPM: 14.3
Min nTPM: 4.2
P10809_1006
4.2
P10809_1024
8.3
P10809_1043
14.3
P10809_1062
7.4
P10809_1083
9.8
P10809_1097
6.8
Memory CD4 T-cell nTPM: 11.2
Samples: 6
Max nTPM: 18.2
Min nTPM: 4.1
P10809_1014
6.8
P10809_1026
18.2
P10809_1045
14.3
P10809_1064
16.6
P10809_1086
7.0
P10809_1113
4.1
Memory CD8 T-cell nTPM: 13.7
Samples: 5
Max nTPM: 20.2
Min nTPM: 6.5
P10809_1012
6.5
P10809_1027
10.8
P10809_1046
20.2
P10809_1065
13.5
P10809_1111
17.6
Naive CD4 T-cell nTPM: 12.4
Samples: 6
Max nTPM: 16.2
Min nTPM: 8.3
P10809_1015
8.3
P10809_1030
10.5
P10809_1049
14.8
P10809_1068
16.2
P10809_1085
16.0
P10809_1112
8.4
Naive CD8 T-cell nTPM: 8.9
Samples: 6
Max nTPM: 14.7
Min nTPM: 5.1
P10809_1016
5.1
P10809_1031
8.7
P10809_1050
14.7
P10809_1069
7.5
P10809_1087
5.5
P10809_1110
11.7
T-reg nTPM: 8.7
Samples: 6
Max nTPM: 16.3
Min nTPM: 0.7
P10809_1018
4.7
P10809_1037
9.2
P10809_1056
16.3
P10809_1075
12.6
P10809_1094
0.7
P10809_1106
8.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.3
Samples: 4
Max nTPM: 17.9
Min nTPM: 5.6
RHH5202_R3573
5.6
RHH5230_R3602
11.0
RHH5259_R3631
17.9
RHH5288_R3660
6.7
Effector memory CD8 T-cell nTPM: 21.8
Samples: 4
Max nTPM: 39.0
Min nTPM: 3.3
RHH5203_R3574
18.8
RHH5231_R3603
25.9
RHH5260_R3632
39.0
RHH5289_R3661
3.3
MAIT T-cell nTPM: 13.4
Samples: 4
Max nTPM: 18.9
Min nTPM: 9.8
RHH5233_R3605
12.0
RHH5205_R3576
13.0
RHH5262_R3634
18.9
RHH5297_R3663
9.8
Memory CD4 T-cell TFH nTPM: 12.7
Samples: 4
Max nTPM: 22.4
Min nTPM: 5.9
RHH5300_R3666
13.4
RHH5236_R3608
9.2
RHH5265_R3637
22.4
RHH5208_R3579
5.9
Memory CD4 T-cell Th1 nTPM: 16.6
Samples: 4
Max nTPM: 34.1
Min nTPM: 3.5
RHH5210_R3581
11.6
RHH5302_R3668
3.5
RHH5238_R3610
17.3
RHH5267_R3639
34.1
Memory CD4 T-cell Th1/Th17 nTPM: 9.8
Samples: 4
Max nTPM: 17.4
Min nTPM: 2.3
RHH5303_R3669
2.3
RHH5211_R3582
11.1
RHH5239_R3611
8.3
RHH5268_R3640
17.4
Memory CD4 T-cell Th17 nTPM: 11.6
Samples: 4
Max nTPM: 31.3
Min nTPM: 2.7
RHH5304_R3670
4.6
RHH5212_R3583
2.7
RHH5240_R3612
7.6
RHH5269_R3641
31.3
Memory CD4 T-cell Th2 nTPM: 17.8
Samples: 4
Max nTPM: 44.8
Min nTPM: 3.7
RHH5305_R3671
3.7
RHH5213_R3584
12.2
RHH5241_R3613
10.3
RHH5270_R3642
44.8
Naive CD4 T-cell nTPM: 12.9
Samples: 4
Max nTPM: 17.9
Min nTPM: 5.8
RHH5306_R3672
5.8
RHH5214_R3585
17.9
RHH5242_R3614
9.8
RHH5271_R3643
17.9
Naive CD8 T-cell nTPM: 6.8
Samples: 4
Max nTPM: 10.1
Min nTPM: 4.6
RHH5201_R3572
7.0
RHH5229_R3601
4.6
RHH5258_R3630
10.1
RHH5287_R3659
5.6
Non-Vd2 gdTCR nTPM: 25.2
Samples: 4
Max nTPM: 29.0
Min nTPM: 21.3
RHH5235_R3607
21.3
RHH5264_R3636
29.0
RHH5207_R3578
21.5
RHH5299_R3665
28.9
T-reg nTPM: 16.3
Samples: 4
Max nTPM: 19.5
Min nTPM: 13.2
RHH5301_R3667
15.9
RHH5237_R3609
13.2
RHH5266_R3638
19.5
RHH5209_R3580
16.5
Terminal effector memory CD4 T-cell nTPM: 26.1
Samples: 2
Max nTPM: 30.9
Min nTPM: 21.2
RHH5243_R3615
30.9
RHH5272_R3644
21.2
Terminal effector memory CD8 T-cell nTPM: 22.5
Samples: 4
Max nTPM: 36.8
Min nTPM: 14.4
RHH5232_R3604
18.0
RHH5204_R3575
20.8
RHH5261_R3633
36.8
RHH5296_R3662
14.4
Vd2 gdTCR nTPM: 19.9
Samples: 4
Max nTPM: 30.4
Min nTPM: 12.1
RHH5234_R3606
20.2
RHH5206_R3577
17.0
RHH5263_R3635
30.4
RHH5298_R3664
12.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
