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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
160.1
nTPM
Monaco:
186.9
nTPM
Schmiedel:
54.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
160.1
HPA sample
nTPM
gdT-cell nTPM: 117.0
Samples: 6
Max nTPM: 155.3
Min nTPM: 93.6
P10809_1007
93.6
P10809_1022
136.4
P10809_1041
155.3
P10809_1060
96.4
P10809_1077
108.2
P10809_1098
112.0
MAIT T-cell nTPM: 160.1
Samples: 6
Max nTPM: 206.2
Min nTPM: 121.9
P10809_1006
121.9
P10809_1024
161.0
P10809_1043
181.7
P10809_1062
150.9
P10809_1083
138.9
P10809_1097
206.2
Memory CD4 T-cell nTPM: 108.4
Samples: 6
Max nTPM: 128.3
Min nTPM: 86.8
P10809_1014
86.8
P10809_1026
128.3
P10809_1045
112.3
P10809_1064
98.6
P10809_1086
109.0
P10809_1113
115.2
Memory CD8 T-cell nTPM: 113.0
Samples: 5
Max nTPM: 147.1
Min nTPM: 92.9
P10809_1012
92.9
P10809_1027
114.3
P10809_1046
147.1
P10809_1065
97.8
P10809_1111
112.8
Naive CD4 T-cell nTPM: 70.9
Samples: 6
Max nTPM: 83.6
Min nTPM: 60.6
P10809_1015
60.6
P10809_1030
66.0
P10809_1049
83.6
P10809_1068
65.0
P10809_1085
81.3
P10809_1112
69.0
Naive CD8 T-cell nTPM: 84.5
Samples: 6
Max nTPM: 102.7
Min nTPM: 57.7
P10809_1016
57.7
P10809_1031
102.7
P10809_1050
87.6
P10809_1069
81.3
P10809_1087
99.6
P10809_1110
77.9
T-reg nTPM: 104.4
Samples: 6
Max nTPM: 120.1
Min nTPM: 89.2
P10809_1018
89.2
P10809_1037
117.1
P10809_1056
90.7
P10809_1075
108.1
P10809_1094
120.1
P10809_1106
101.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
186.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 127.9
Samples: 4
Max nTPM: 139.2
Min nTPM: 103.3
RHH5202_R3573
135.2
RHH5230_R3602
139.2
RHH5259_R3631
103.3
RHH5288_R3660
133.8
Effector memory CD8 T-cell nTPM: 144.1
Samples: 4
Max nTPM: 185.9
Min nTPM: 119.0
RHH5203_R3574
142.8
RHH5231_R3603
128.6
RHH5260_R3632
119.0
RHH5289_R3661
185.9
MAIT T-cell nTPM: 186.9
Samples: 4
Max nTPM: 210.4
Min nTPM: 158.3
RHH5233_R3605
202.3
RHH5205_R3576
158.3
RHH5262_R3634
210.4
RHH5297_R3663
176.6
Memory CD4 T-cell TFH nTPM: 116.7
Samples: 4
Max nTPM: 127.5
Min nTPM: 108.6
RHH5300_R3666
117.0
RHH5236_R3608
127.5
RHH5265_R3637
108.6
RHH5208_R3579
113.7
Memory CD4 T-cell Th1 nTPM: 110.5
Samples: 4
Max nTPM: 124.0
Min nTPM: 101.2
RHH5210_R3581
115.1
RHH5302_R3668
124.0
RHH5238_R3610
101.8
RHH5267_R3639
101.2
Memory CD4 T-cell Th1/Th17 nTPM: 154.6
Samples: 4
Max nTPM: 210.2
Min nTPM: 94.1
RHH5303_R3669
189.2
RHH5211_R3582
210.2
RHH5239_R3611
94.1
RHH5268_R3640
124.7
Memory CD4 T-cell Th17 nTPM: 138.5
Samples: 4
Max nTPM: 145.7
Min nTPM: 120.5
RHH5304_R3670
142.4
RHH5212_R3583
145.7
RHH5240_R3612
145.2
RHH5269_R3641
120.5
Memory CD4 T-cell Th2 nTPM: 169.9
Samples: 4
Max nTPM: 198.1
Min nTPM: 140.9
RHH5305_R3671
161.4
RHH5213_R3584
198.1
RHH5241_R3613
179.3
RHH5270_R3642
140.9
Naive CD4 T-cell nTPM: 83.3
Samples: 4
Max nTPM: 89.9
Min nTPM: 78.8
RHH5306_R3672
89.9
RHH5214_R3585
83.3
RHH5242_R3614
81.3
RHH5271_R3643
78.8
Naive CD8 T-cell nTPM: 78.0
Samples: 4
Max nTPM: 92.5
Min nTPM: 52.8
RHH5201_R3572
76.4
RHH5229_R3601
52.8
RHH5258_R3630
92.5
RHH5287_R3659
90.2
Non-Vd2 gdTCR nTPM: 136.4
Samples: 4
Max nTPM: 163.6
Min nTPM: 115.6
RHH5235_R3607
115.6
RHH5264_R3636
163.6
RHH5207_R3578
136.3
RHH5299_R3665
130.1
T-reg nTPM: 108.7
Samples: 4
Max nTPM: 145.8
Min nTPM: 94.3
RHH5301_R3667
96.7
RHH5237_R3609
145.8
RHH5266_R3638
94.3
RHH5209_R3580
98.1
Terminal effector memory CD4 T-cell nTPM: 102.0
Samples: 2
Max nTPM: 114.0
Min nTPM: 90.0
RHH5243_R3615
90.0
RHH5272_R3644
114.0
Terminal effector memory CD8 T-cell nTPM: 119.1
Samples: 4
Max nTPM: 126.4
Min nTPM: 105.2
RHH5232_R3604
105.2
RHH5204_R3575
126.4
RHH5261_R3633
119.0
RHH5296_R3662
125.8
Vd2 gdTCR nTPM: 156.8
Samples: 4
Max nTPM: 180.3
Min nTPM: 138.3
RHH5234_R3606
180.3
RHH5206_R3577
158.1
RHH5263_R3635
138.3
RHH5298_R3664
150.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
