We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
78.9
nTPM
Monaco:
104.0
nTPM
Schmiedel:
169.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.9
HPA sample
nTPM
gdT-cell nTPM: 57.4
Samples: 6
Max nTPM: 79.5
Min nTPM: 36.6
P10809_1007
36.6
P10809_1022
79.5
P10809_1041
72.9
P10809_1060
50.7
P10809_1077
50.2
P10809_1098
54.2
MAIT T-cell nTPM: 78.9
Samples: 6
Max nTPM: 114.0
Min nTPM: 49.8
P10809_1006
49.8
P10809_1024
114.0
P10809_1043
97.2
P10809_1062
62.4
P10809_1083
54.2
P10809_1097
95.8
Memory CD4 T-cell nTPM: 57.0
Samples: 6
Max nTPM: 70.9
Min nTPM: 41.1
P10809_1014
41.1
P10809_1026
63.3
P10809_1045
70.9
P10809_1064
46.1
P10809_1086
62.4
P10809_1113
58.2
Memory CD8 T-cell nTPM: 61.4
Samples: 5
Max nTPM: 75.6
Min nTPM: 46.8
P10809_1012
61.9
P10809_1027
67.3
P10809_1046
75.6
P10809_1065
55.6
P10809_1111
46.8
Naive CD4 T-cell nTPM: 51.4
Samples: 6
Max nTPM: 66.5
Min nTPM: 35.7
P10809_1015
35.7
P10809_1030
45.5
P10809_1049
66.5
P10809_1068
53.8
P10809_1085
59.3
P10809_1112
47.8
Naive CD8 T-cell nTPM: 54.1
Samples: 6
Max nTPM: 67.5
Min nTPM: 36.2
P10809_1016
36.2
P10809_1031
59.0
P10809_1050
67.5
P10809_1069
61.6
P10809_1087
49.2
P10809_1110
51.3
T-reg nTPM: 75.6
Samples: 6
Max nTPM: 152.1
Min nTPM: 48.4
P10809_1018
48.4
P10809_1037
59.6
P10809_1056
152.1
P10809_1075
51.9
P10809_1094
73.4
P10809_1106
68.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 78.8
Samples: 4
Max nTPM: 93.7
Min nTPM: 64.3
RHH5202_R3573
64.3
RHH5230_R3602
93.7
RHH5259_R3631
85.7
RHH5288_R3660
71.4
Effector memory CD8 T-cell nTPM: 99.2
Samples: 4
Max nTPM: 111.5
Min nTPM: 89.1
RHH5203_R3574
89.1
RHH5231_R3603
91.0
RHH5260_R3632
105.0
RHH5289_R3661
111.5
MAIT T-cell nTPM: 104.0
Samples: 4
Max nTPM: 140.7
Min nTPM: 88.0
RHH5233_R3605
91.5
RHH5205_R3576
140.7
RHH5262_R3634
88.0
RHH5297_R3663
95.8
Memory CD4 T-cell TFH nTPM: 73.8
Samples: 4
Max nTPM: 96.3
Min nTPM: 58.3
RHH5300_R3666
64.6
RHH5236_R3608
96.3
RHH5265_R3637
76.1
RHH5208_R3579
58.3
Memory CD4 T-cell Th1 nTPM: 85.9
Samples: 4
Max nTPM: 96.4
Min nTPM: 72.7
RHH5210_R3581
72.7
RHH5302_R3668
84.5
RHH5238_R3610
96.4
RHH5267_R3639
90.1
Memory CD4 T-cell Th1/Th17 nTPM: 98.5
Samples: 4
Max nTPM: 109.3
Min nTPM: 88.9
RHH5303_R3669
109.3
RHH5211_R3582
105.4
RHH5239_R3611
88.9
RHH5268_R3640
90.3
Memory CD4 T-cell Th17 nTPM: 96.8
Samples: 4
Max nTPM: 106.5
Min nTPM: 84.9
RHH5304_R3670
106.5
RHH5212_R3583
84.9
RHH5240_R3612
96.4
RHH5269_R3641
99.4
Memory CD4 T-cell Th2 nTPM: 82.9
Samples: 4
Max nTPM: 109.4
Min nTPM: 58.2
RHH5305_R3671
89.5
RHH5213_R3584
109.4
RHH5241_R3613
58.2
RHH5270_R3642
74.3
Naive CD4 T-cell nTPM: 65.9
Samples: 4
Max nTPM: 68.8
Min nTPM: 60.7
RHH5306_R3672
68.8
RHH5214_R3585
66.4
RHH5242_R3614
60.7
RHH5271_R3643
67.6
Naive CD8 T-cell nTPM: 67.0
Samples: 4
Max nTPM: 90.3
Min nTPM: 57.9
RHH5201_R3572
58.5
RHH5229_R3601
61.1
RHH5258_R3630
57.9
RHH5287_R3659
90.3
Non-Vd2 gdTCR nTPM: 103.1
Samples: 4
Max nTPM: 117.3
Min nTPM: 79.9
RHH5235_R3607
117.3
RHH5264_R3636
109.3
RHH5207_R3578
106.0
RHH5299_R3665
79.9
T-reg nTPM: 89.4
Samples: 4
Max nTPM: 119.1
Min nTPM: 72.1
RHH5301_R3667
81.1
RHH5237_R3609
119.1
RHH5266_R3638
85.1
RHH5209_R3580
72.1
Terminal effector memory CD4 T-cell nTPM: 78.9
Samples: 2
Max nTPM: 86.9
Min nTPM: 70.9
RHH5243_R3615
86.9
RHH5272_R3644
70.9
Terminal effector memory CD8 T-cell nTPM: 87.6
Samples: 4
Max nTPM: 98.9
Min nTPM: 71.4
RHH5232_R3604
98.9
RHH5204_R3575
71.4
RHH5261_R3633
82.9
RHH5296_R3662
97.0
Vd2 gdTCR nTPM: 82.9
Samples: 4
Max nTPM: 123.9
Min nTPM: 63.4
RHH5234_R3606
80.4
RHH5206_R3577
63.7
RHH5263_R3635
123.9
RHH5298_R3664
63.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
