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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
83.4
nTPM
Monaco:
108.5
nTPM
Schmiedel:
468.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.4
HPA sample
nTPM
gdT-cell nTPM: 47.4
Samples: 6
Max nTPM: 57.5
Min nTPM: 28.1
P10809_1007
57.5
P10809_1022
52.0
P10809_1041
45.9
P10809_1060
47.7
P10809_1077
53.0
P10809_1098
28.1
MAIT T-cell nTPM: 43.6
Samples: 6
Max nTPM: 64.7
Min nTPM: 23.2
P10809_1006
64.7
P10809_1024
42.0
P10809_1043
41.7
P10809_1062
52.7
P10809_1083
37.3
P10809_1097
23.2
Memory CD4 T-cell nTPM: 47.9
Samples: 6
Max nTPM: 58.5
Min nTPM: 36.0
P10809_1014
58.5
P10809_1026
37.3
P10809_1045
56.7
P10809_1064
49.4
P10809_1086
49.4
P10809_1113
36.0
Memory CD8 T-cell nTPM: 48.0
Samples: 5
Max nTPM: 63.5
Min nTPM: 26.7
P10809_1012
63.5
P10809_1027
49.0
P10809_1046
48.3
P10809_1065
52.4
P10809_1111
26.7
Naive CD4 T-cell nTPM: 44.8
Samples: 6
Max nTPM: 73.9
Min nTPM: 24.6
P10809_1015
52.6
P10809_1030
39.1
P10809_1049
30.6
P10809_1068
73.9
P10809_1085
47.9
P10809_1112
24.6
Naive CD8 T-cell nTPM: 39.2
Samples: 6
Max nTPM: 52.3
Min nTPM: 19.2
P10809_1016
46.4
P10809_1031
31.4
P10809_1050
39.1
P10809_1069
52.3
P10809_1087
46.8
P10809_1110
19.2
T-reg nTPM: 83.4
Samples: 6
Max nTPM: 115.4
Min nTPM: 62.7
P10809_1018
106.0
P10809_1037
72.7
P10809_1056
62.7
P10809_1075
79.0
P10809_1094
115.4
P10809_1106
64.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
108.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 82.8
Samples: 4
Max nTPM: 112.8
Min nTPM: 52.1
RHH5202_R3573
64.3
RHH5230_R3602
52.1
RHH5259_R3631
112.8
RHH5288_R3660
101.9
Effector memory CD8 T-cell nTPM: 69.4
Samples: 4
Max nTPM: 97.2
Min nTPM: 55.7
RHH5203_R3574
57.4
RHH5231_R3603
55.7
RHH5260_R3632
97.2
RHH5289_R3661
67.4
MAIT T-cell nTPM: 58.9
Samples: 4
Max nTPM: 88.5
Min nTPM: 35.4
RHH5233_R3605
88.5
RHH5205_R3576
39.1
RHH5262_R3634
72.4
RHH5297_R3663
35.4
Memory CD4 T-cell TFH nTPM: 100.5
Samples: 4
Max nTPM: 122.5
Min nTPM: 80.0
RHH5300_R3666
80.0
RHH5236_R3608
88.4
RHH5265_R3637
110.9
RHH5208_R3579
122.5
Memory CD4 T-cell Th1 nTPM: 105.3
Samples: 4
Max nTPM: 134.7
Min nTPM: 69.5
RHH5210_R3581
69.5
RHH5302_R3668
89.2
RHH5238_R3610
134.7
RHH5267_R3639
127.6
Memory CD4 T-cell Th1/Th17 nTPM: 94.0
Samples: 4
Max nTPM: 115.6
Min nTPM: 75.5
RHH5303_R3669
75.5
RHH5211_R3582
86.4
RHH5239_R3611
115.6
RHH5268_R3640
98.3
Memory CD4 T-cell Th17 nTPM: 87.8
Samples: 4
Max nTPM: 119.9
Min nTPM: 55.5
RHH5304_R3670
68.7
RHH5212_R3583
55.5
RHH5240_R3612
119.9
RHH5269_R3641
106.9
Memory CD4 T-cell Th2 nTPM: 102.5
Samples: 4
Max nTPM: 127.3
Min nTPM: 82.4
RHH5305_R3671
106.7
RHH5213_R3584
82.4
RHH5241_R3613
93.6
RHH5270_R3642
127.3
Naive CD4 T-cell nTPM: 89.1
Samples: 4
Max nTPM: 145.5
Min nTPM: 66.7
RHH5306_R3672
66.7
RHH5214_R3585
75.4
RHH5242_R3614
68.6
RHH5271_R3643
145.5
Naive CD8 T-cell nTPM: 73.2
Samples: 4
Max nTPM: 82.7
Min nTPM: 63.9
RHH5201_R3572
65.5
RHH5229_R3601
80.8
RHH5258_R3630
82.7
RHH5287_R3659
63.9
Non-Vd2 gdTCR nTPM: 75.6
Samples: 4
Max nTPM: 87.3
Min nTPM: 65.6
RHH5235_R3607
67.1
RHH5264_R3636
82.2
RHH5207_R3578
87.3
RHH5299_R3665
65.6
T-reg nTPM: 108.5
Samples: 4
Max nTPM: 147.6
Min nTPM: 74.3
RHH5301_R3667
74.3
RHH5237_R3609
123.1
RHH5266_R3638
147.6
RHH5209_R3580
89.1
Terminal effector memory CD4 T-cell nTPM: 84.7
Samples: 2
Max nTPM: 93.5
Min nTPM: 75.9
RHH5243_R3615
75.9
RHH5272_R3644
93.5
Terminal effector memory CD8 T-cell nTPM: 70.0
Samples: 4
Max nTPM: 103.3
Min nTPM: 42.6
RHH5232_R3604
67.5
RHH5204_R3575
42.6
RHH5261_R3633
103.3
RHH5296_R3662
66.5
Vd2 gdTCR nTPM: 65.9
Samples: 4
Max nTPM: 90.1
Min nTPM: 42.0
RHH5234_R3606
42.0
RHH5206_R3577
70.5
RHH5263_R3635
90.1
RHH5298_R3664
61.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
