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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
107.4
nTPM
Monaco:
199.0
nTPM
Schmiedel:
528.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.4
HPA sample
nTPM
gdT-cell nTPM: 100.4
Samples: 6
Max nTPM: 129.5
Min nTPM: 59.5
P10809_1007
59.5
P10809_1022
122.1
P10809_1041
129.5
P10809_1060
85.1
P10809_1077
103.7
P10809_1098
102.2
MAIT T-cell nTPM: 104.1
Samples: 6
Max nTPM: 129.0
Min nTPM: 84.9
P10809_1006
84.9
P10809_1024
129.0
P10809_1043
94.7
P10809_1062
97.4
P10809_1083
93.8
P10809_1097
124.8
Memory CD4 T-cell nTPM: 94.3
Samples: 6
Max nTPM: 114.6
Min nTPM: 63.0
P10809_1014
63.0
P10809_1026
91.5
P10809_1045
112.4
P10809_1064
89.2
P10809_1086
114.6
P10809_1113
95.2
Memory CD8 T-cell nTPM: 92.9
Samples: 5
Max nTPM: 106.9
Min nTPM: 59.6
P10809_1012
59.6
P10809_1027
96.2
P10809_1046
104.3
P10809_1065
106.9
P10809_1111
97.7
Naive CD4 T-cell nTPM: 94.9
Samples: 6
Max nTPM: 145.6
Min nTPM: 60.4
P10809_1015
60.4
P10809_1030
83.3
P10809_1049
145.6
P10809_1068
93.5
P10809_1085
97.7
P10809_1112
88.9
Naive CD8 T-cell nTPM: 104.6
Samples: 6
Max nTPM: 123.5
Min nTPM: 51.3
P10809_1016
51.3
P10809_1031
120.2
P10809_1050
114.0
P10809_1069
123.5
P10809_1087
123.5
P10809_1110
95.2
T-reg nTPM: 107.4
Samples: 6
Max nTPM: 140.4
Min nTPM: 69.1
P10809_1018
69.1
P10809_1037
115.9
P10809_1056
140.4
P10809_1075
86.1
P10809_1094
123.6
P10809_1106
109.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
199.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 141.7
Samples: 4
Max nTPM: 175.9
Min nTPM: 113.4
RHH5202_R3573
175.9
RHH5230_R3602
121.8
RHH5259_R3631
155.8
RHH5288_R3660
113.4
Effector memory CD8 T-cell nTPM: 192.9
Samples: 4
Max nTPM: 222.6
Min nTPM: 179.5
RHH5203_R3574
222.6
RHH5231_R3603
179.5
RHH5260_R3632
181.8
RHH5289_R3661
187.8
MAIT T-cell nTPM: 186.8
Samples: 4
Max nTPM: 296.4
Min nTPM: 118.0
RHH5233_R3605
175.1
RHH5205_R3576
296.4
RHH5262_R3634
157.5
RHH5297_R3663
118.0
Memory CD4 T-cell TFH nTPM: 150.7
Samples: 4
Max nTPM: 187.2
Min nTPM: 114.5
RHH5300_R3666
114.5
RHH5236_R3608
158.3
RHH5265_R3637
142.9
RHH5208_R3579
187.2
Memory CD4 T-cell Th1 nTPM: 140.4
Samples: 4
Max nTPM: 157.0
Min nTPM: 122.6
RHH5210_R3581
139.1
RHH5302_R3668
122.6
RHH5238_R3610
157.0
RHH5267_R3639
142.9
Memory CD4 T-cell Th1/Th17 nTPM: 169.0
Samples: 4
Max nTPM: 195.2
Min nTPM: 144.9
RHH5303_R3669
152.8
RHH5211_R3582
182.9
RHH5239_R3611
195.2
RHH5268_R3640
144.9
Memory CD4 T-cell Th17 nTPM: 156.8
Samples: 4
Max nTPM: 166.8
Min nTPM: 144.9
RHH5304_R3670
144.9
RHH5212_R3583
166.8
RHH5240_R3612
150.0
RHH5269_R3641
165.4
Memory CD4 T-cell Th2 nTPM: 151.2
Samples: 4
Max nTPM: 175.7
Min nTPM: 127.5
RHH5305_R3671
130.1
RHH5213_R3584
175.7
RHH5241_R3613
171.3
RHH5270_R3642
127.5
Naive CD4 T-cell nTPM: 131.2
Samples: 4
Max nTPM: 163.8
Min nTPM: 107.4
RHH5306_R3672
107.4
RHH5214_R3585
163.8
RHH5242_R3614
134.5
RHH5271_R3643
119.2
Naive CD8 T-cell nTPM: 147.3
Samples: 4
Max nTPM: 188.0
Min nTPM: 130.3
RHH5201_R3572
188.0
RHH5229_R3601
138.6
RHH5258_R3630
130.3
RHH5287_R3659
132.4
Non-Vd2 gdTCR nTPM: 199.0
Samples: 4
Max nTPM: 261.9
Min nTPM: 158.8
RHH5235_R3607
208.3
RHH5264_R3636
167.0
RHH5207_R3578
261.9
RHH5299_R3665
158.8
T-reg nTPM: 130.6
Samples: 4
Max nTPM: 154.7
Min nTPM: 108.9
RHH5301_R3667
108.9
RHH5237_R3609
122.4
RHH5266_R3638
136.2
RHH5209_R3580
154.7
Terminal effector memory CD4 T-cell nTPM: 178.4
Samples: 2
Max nTPM: 204.1
Min nTPM: 152.7
RHH5243_R3615
204.1
RHH5272_R3644
152.7
Terminal effector memory CD8 T-cell nTPM: 188.7
Samples: 4
Max nTPM: 201.7
Min nTPM: 176.1
RHH5232_R3604
177.2
RHH5204_R3575
199.8
RHH5261_R3633
201.7
RHH5296_R3662
176.1
Vd2 gdTCR nTPM: 179.0
Samples: 4
Max nTPM: 222.1
Min nTPM: 125.0
RHH5234_R3606
170.4
RHH5206_R3577
222.1
RHH5263_R3635
198.6
RHH5298_R3664
125.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
