HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:97.6 nTPM
HPA Brain:127.4 nTPM
GTEx:97.6 nTPM
FANTOM5:61.2 Scaled Tags Per Million
Pig:47.4 nTPM
Mouse:26.1 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067154Antibody CAB037059
Glial cells HighMedium
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 127.4
Sample id Sample description nTPM
Hippocampus
nTPM: 127.4
2148 Female, age 91, left hemisphere 151.8
1911 Female, age 85, right hemisphere 133.6
2529 Female, age 94, left hemisphere 132.5
1898 Male, age 80, left hemisphere 127.2
2621 Female, age 67, right hemisphere 110.9
1855 Male, age 76, left hemisphere 108.6
Dentate gyrus
nTPM: 101.5
2528 Male, age 74, both hemispheres 136.7
1927 Female, age 91, both hemispheres 100.5
2246 Female, age 85, both hemispheres 98.3
2531 Female, age 67, both hemispheres 96.7
2530 Female, age 94, left hemisphere 91.3
2010 Male, age 76, both hemispheres 85.6
Entorhinal gyrus
nTPM: 98.5
2117 Female, age 91, right hemisphere 117.8
2764 Male, age 80, right hemisphere 104.7
1938 Female, age 85, left hemisphere 103.6
1787 Male, age 76, left hemisphere 93.3
2686 Male, age 75, right hemisphere 89.8
2613 Female, age 94, left hemisphere 82.2
Hippocampus, CA1
nTPM: 107.5
2527 Male, age 74, both hemispheres 140.3
1873 Female, age 85, both hemispheres 125.1
2082 Female, age 91, right hemisphere 105.3
2045 Male, age 76, both hemispheres 86.1
2749 Male, age 80, left hemisphere 80.7
Hippocampus, CA2
nTPM: 103.6
2249 Male, age 74, both hemispheres 124.4
2113 Female, age 91, right hemisphere 117.3
1963 Male, age 80, left hemisphere 114.4
1940 Female, age 85, left hemisphere 104.5
2437 Female, age 94, left hemisphere 89.9
1892 Male, age 76, both hemispheres 71.1
Hippocampus, CA3
nTPM: 103.3
2861 Female, age 67, both hemispheres 138.3
1891 Female, age 85, both hemispheres 108.2
2620 Female, age 94, left hemisphere 103.0
2436 Male, age 74, both hemispheres 100.4
1867 Male, age 76, both hemispheres 89.6
2137 Male, age 80, left hemisphere 80.1
Parahippocampal cortex
nTPM: 99.3
2622 Female, age 67, right hemisphere 130.5
2692 Male, age 74, both hemispheres 121.5
1933 Female, age 85, both hemispheres 105.2
2245 Female, age 91, both hemispheres 102.6
1990 Female, age 91, right hemisphere 95.1
2018 Male, age 76, both hemispheres 93.0
2250 Female, age 67, right hemisphere 92.7
1850 Male, age 80, both hemispheres 88.5
2532 Female, age 72, left hemisphere 87.0
2693 Female, age 94, both hemispheres 76.9
Perirhinal gyrus
nTPM: 89.9
1794 Male, age 80, right hemisphere 109.8
1847 Female, age 91, left hemisphere 95.9
1841 Female, age 85, right hemisphere 93.0
2521 Female, age 94, right hemisphere 80.9
2848 Male, age 76, right hemisphere 69.7
Subiculum
nTPM: 107.4
2619 Male, age 74, both hemispheres 145.6
2729 Female, age 91, right hemisphere 141.8
1977 Female, age 85, both hemispheres 95.3
2438 Female, age 94, left hemisphere 91.2
2042 Male, age 76, both hemispheres 85.9
1901 Male, age 80, both hemispheres 84.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 97.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 97.6
Samples: 197

Max nTPM: 257.7
Min nTPM: 24.8
Std nTPM: 39.6
Median nTPM: 90.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 257.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 217.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 205.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 205.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 194.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 188.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 184.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 183.9
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 173.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 172.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 171.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.2
FF:10153-102I9 76 years, female 77.9
FF:10169-103B7 60 years, female 44.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.4
Pig sample Sample description nTPM
Subiculum
nTPM: 42.4
Samples: 4

Max nTPM: 50.5
Min nTPM: 35.8
Sample A Female 50.5
Sample B Female 43.2
Sample C Male 40.0
Sample D Male 35.8
Dorsal hippocampus
nTPM: 45.1
Samples: 4

Max nTPM: 52.4
Min nTPM: 41.1
Sample A Female 52.4
Sample B Female 44.1
Sample C Male 42.7
Sample D Male 41.1
Entorhinal cortex
nTPM: 39.7
Samples: 4

Max nTPM: 45.1
Min nTPM: 34.0
Sample A Female 37.1
Sample B Female 42.5
Sample C Male 45.1
Sample D Male 34.0
Ventral hippocampus
nTPM: 47.4
Samples: 4

Max nTPM: 57.3
Min nTPM: 41.9
Sample A Female 44.6
Sample B Female 41.9
Sample C Male 57.3
Sample D Male 45.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.6
Samples: 4

Max nTPM: 24.4
Min nTPM: 20.2
Sample A Male 23.1
Sample B Male 20.2
Sample C Female 24.4
Sample D Female 22.5
Hippocampal formation
nTPM: 26.1
Samples: 4

Max nTPM: 28.2
Min nTPM: 24.1
Sample A Male 24.1
Sample B Male 24.7
Sample C Female 27.5
Sample D Female 28.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
70474011 Antisense, RP_050614_04_G02, Mouse strain C57BL/6J (56 days, male) 0.7

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