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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
45.6
nTPM
HPA Brain:
72.3
nTPM
GTEx:
45.6
nTPM
FANTOM5:
106.9
Scaled Tags Per Million
Pig:
40.9
nTPM
Mouse:
30.1
nTPM
Allen mouse:
5.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
72.3
Sample id
Sample description
nTPM
Amygdala nTPM: 48.3
2517
Female, age 94, left hemisphere
58.5
2514
Male, age 75, right hemisphere
55.0
2695
Female, age 67, right hemisphere
47.5
2814
Male, age 76, right hemisphere
41.8
1987
Female, age 91, left hemisphere
38.5
Basal amygdala nTPM: 68.9
2827
Female, age 67, right hemisphere
95.7
2685
Female, age 94, left hemisphere
76.7
2110
Male, age 80, left hemisphere
69.0
2243
Female, age 91, right hemisphere
65.2
2609
Male, age 75, right hemisphere
53.8
1955
Male, age 76, both hemispheres
53.1
Central amygdala nTPM: 56.4
2826
Female, age 94, left hemisphere
84.2
2239
Male, age 80, left hemisphere
71.4
2515
Male, age 75, right hemisphere
47.9
1905
Male, age 76, both hemispheres
40.7
2701
Female, age 91, right hemisphere
37.9
Corticomedial amygdala nTPM: 57.7
2535
Female, age 67, right hemisphere
81.6
2429
Female, age 94, left hemisphere
65.0
2829
Male, age 80, left hemisphere
65.0
2428
Male, age 75, right hemisphere
54.0
2240
Male, age 76, both hemispheres
50.8
2242
Female, age 91, right hemisphere
29.8
Lateral amygdala nTPM: 72.3
2830
Female, age 67, right hemisphere
91.5
2534
Female, age 94, left hemisphere
85.0
2256
Male, age 80, left hemisphere
83.0
2516
Male, age 75, right hemisphere
63.7
2255
Female, age 91, right hemisphere
61.9
1883
Male, age 76, both hemispheres
48.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
45.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 45.6
Samples: 152
Max nTPM: 91.3
Min nTPM: 3.7
Std nTPM: 15.2
Median nTPM: 45.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
91.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
89.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
80.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
77.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
76.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
75.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
72.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
70.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
70.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
69.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
68.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
67.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
66.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
66.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
66.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
66.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
65.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
65.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
64.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
63.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
63.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
62.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
62.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
61.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
61.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
60.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
60.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
60.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
59.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
58.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
58.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
58.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
55.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
55.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
55.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
55.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
54.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
54.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
54.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
53.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
53.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
53.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
53.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
53.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
52.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
52.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
51.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
51.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
51.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
50.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
50.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
49.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
49.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
49.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
49.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
49.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
49.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
48.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
48.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
48.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
48.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
47.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
47.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
47.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
47.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
47.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
47.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
46.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
46.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
46.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
45.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
45.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
45.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
45.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
45.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
45.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
45.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
44.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
44.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
44.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
43.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
43.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
43.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
43.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
43.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
42.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
42.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
42.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
42.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
41.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
41.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
41.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
40.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
40.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
40.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
40.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
39.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
39.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
39.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
39.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
39.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
38.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
38.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
38.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
38.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
37.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
37.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
37.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
35.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
35.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
35.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
35.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
34.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
34.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
34.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
33.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
33.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
33.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
33.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
33.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
33.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
32.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
32.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
32.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
32.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
32.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
32.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
32.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
32.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
32.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
31.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
30.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
29.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
29.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
28.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
28.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
28.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
27.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
25.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
25.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
25.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
24.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
24.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
23.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
21.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
21.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
21.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
20.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
17.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
10.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
8.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
30.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 30.1
Samples: 4
Max nTPM: 45.7
Min nTPM: 21.3
Sample A
Male
21.3
Sample B
Male
26.8
Sample C
Female
45.7
Sample D
Female
26.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
