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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
368.6
nTPM
Monaco:
761.0
nTPM
Schmiedel:
196.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
368.6
HPA sample
nTPM
gdT-cell nTPM: 368.7
Samples: 6
Max nTPM: 507.1
Min nTPM: 239.3
P10809_1007
239.3
P10809_1022
441.5
P10809_1041
507.1
P10809_1060
326.7
P10809_1077
313.2
P10809_1098
384.1
MAIT T-cell nTPM: 229.1
Samples: 6
Max nTPM: 319.8
Min nTPM: 161.2
P10809_1006
161.2
P10809_1024
319.8
P10809_1043
247.3
P10809_1062
192.1
P10809_1083
194.4
P10809_1097
259.7
Memory CD4 T-cell nTPM: 101.1
Samples: 6
Max nTPM: 159.7
Min nTPM: 55.5
P10809_1014
55.5
P10809_1026
75.6
P10809_1045
110.2
P10809_1064
132.8
P10809_1086
159.7
P10809_1113
72.8
Memory CD8 T-cell nTPM: 268.2
Samples: 5
Max nTPM: 316.7
Min nTPM: 179.3
P10809_1012
179.3
P10809_1027
303.2
P10809_1046
316.7
P10809_1065
288.7
P10809_1111
252.9
Naive CD4 T-cell nTPM: 78.9
Samples: 6
Max nTPM: 123.2
Min nTPM: 43.6
P10809_1015
43.6
P10809_1030
68.0
P10809_1049
95.6
P10809_1068
77.1
P10809_1085
123.2
P10809_1112
65.7
Naive CD8 T-cell nTPM: 202.8
Samples: 6
Max nTPM: 342.8
Min nTPM: 61.5
P10809_1016
61.5
P10809_1031
190.3
P10809_1050
205.2
P10809_1069
280.8
P10809_1087
342.8
P10809_1110
136.1
T-reg nTPM: 75.2
Samples: 6
Max nTPM: 89.9
Min nTPM: 58.2
P10809_1018
58.2
P10809_1037
83.9
P10809_1056
83.4
P10809_1075
67.9
P10809_1094
67.6
P10809_1106
89.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
761.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 227.3
Samples: 4
Max nTPM: 300.4
Min nTPM: 174.7
RHH5202_R3573
174.7
RHH5230_R3602
300.4
RHH5259_R3631
217.1
RHH5288_R3660
217.1
Effector memory CD8 T-cell nTPM: 586.3
Samples: 4
Max nTPM: 657.4
Min nTPM: 479.7
RHH5203_R3574
479.7
RHH5231_R3603
575.6
RHH5260_R3632
632.5
RHH5289_R3661
657.4
MAIT T-cell nTPM: 366.1
Samples: 4
Max nTPM: 418.7
Min nTPM: 325.8
RHH5233_R3605
418.7
RHH5205_R3576
325.8
RHH5262_R3634
377.0
RHH5297_R3663
343.0
Memory CD4 T-cell TFH nTPM: 122.3
Samples: 4
Max nTPM: 161.3
Min nTPM: 89.2
RHH5300_R3666
106.1
RHH5236_R3608
161.3
RHH5265_R3637
132.6
RHH5208_R3579
89.2
Memory CD4 T-cell Th1 nTPM: 139.3
Samples: 4
Max nTPM: 171.8
Min nTPM: 88.1
RHH5210_R3581
88.1
RHH5302_R3668
133.3
RHH5238_R3610
171.8
RHH5267_R3639
163.8
Memory CD4 T-cell Th1/Th17 nTPM: 138.8
Samples: 4
Max nTPM: 185.3
Min nTPM: 119.1
RHH5303_R3669
185.3
RHH5211_R3582
119.1
RHH5239_R3611
120.2
RHH5268_R3640
130.7
Memory CD4 T-cell Th17 nTPM: 138.7
Samples: 4
Max nTPM: 174.7
Min nTPM: 97.6
RHH5304_R3670
174.7
RHH5212_R3583
97.6
RHH5240_R3612
166.5
RHH5269_R3641
116.1
Memory CD4 T-cell Th2 nTPM: 111.4
Samples: 4
Max nTPM: 129.6
Min nTPM: 99.8
RHH5305_R3671
101.3
RHH5213_R3584
99.8
RHH5241_R3613
114.8
RHH5270_R3642
129.6
Naive CD4 T-cell nTPM: 112.8
Samples: 4
Max nTPM: 152.8
Min nTPM: 90.7
RHH5306_R3672
90.7
RHH5214_R3585
103.8
RHH5242_R3614
152.8
RHH5271_R3643
104.0
Naive CD8 T-cell nTPM: 109.4
Samples: 4
Max nTPM: 119.7
Min nTPM: 102.1
RHH5201_R3572
119.7
RHH5229_R3601
108.0
RHH5258_R3630
107.9
RHH5287_R3659
102.1
Non-Vd2 gdTCR nTPM: 761.0
Samples: 4
Max nTPM: 870.1
Min nTPM: 701.0
RHH5235_R3607
766.9
RHH5264_R3636
870.1
RHH5207_R3578
701.0
RHH5299_R3665
706.0
T-reg nTPM: 114.7
Samples: 4
Max nTPM: 146.6
Min nTPM: 89.2
RHH5301_R3667
108.3
RHH5237_R3609
146.6
RHH5266_R3638
114.6
RHH5209_R3580
89.2
Terminal effector memory CD4 T-cell nTPM: 597.9
Samples: 2
Max nTPM: 677.6
Min nTPM: 518.2
RHH5243_R3615
677.6
RHH5272_R3644
518.2
Terminal effector memory CD8 T-cell nTPM: 750.1
Samples: 4
Max nTPM: 896.1
Min nTPM: 669.2
RHH5232_R3604
896.1
RHH5204_R3575
669.2
RHH5261_R3633
731.4
RHH5296_R3662
703.6
Vd2 gdTCR nTPM: 581.1
Samples: 4
Max nTPM: 670.5
Min nTPM: 438.0
RHH5234_R3606
569.2
RHH5206_R3577
670.5
RHH5263_R3635
646.7
RHH5298_R3664
438.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
