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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
26.7
nTPM
Monaco:
16.9
nTPM
Schmiedel:
11.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.7
HPA sample
nTPM
gdT-cell nTPM: 20.9
Samples: 6
Max nTPM: 31.9
Min nTPM: 16.6
P10809_1007
17.2
P10809_1022
22.3
P10809_1041
19.9
P10809_1060
31.9
P10809_1077
17.2
P10809_1098
16.6
MAIT T-cell nTPM: 21.6
Samples: 6
Max nTPM: 28.8
Min nTPM: 14.9
P10809_1006
19.7
P10809_1024
24.4
P10809_1043
14.9
P10809_1062
28.8
P10809_1083
18.8
P10809_1097
23.1
Memory CD4 T-cell nTPM: 25.5
Samples: 6
Max nTPM: 35.5
Min nTPM: 18.4
P10809_1014
18.4
P10809_1026
35.5
P10809_1045
24.8
P10809_1064
31.7
P10809_1086
21.3
P10809_1113
21.3
Memory CD8 T-cell nTPM: 21.2
Samples: 5
Max nTPM: 27.5
Min nTPM: 17.1
P10809_1012
21.2
P10809_1027
20.4
P10809_1046
19.9
P10809_1065
27.5
P10809_1111
17.1
Naive CD4 T-cell nTPM: 25.7
Samples: 6
Max nTPM: 32.5
Min nTPM: 21.1
P10809_1015
21.1
P10809_1030
32.5
P10809_1049
28.3
P10809_1068
26.0
P10809_1085
23.0
P10809_1112
23.3
Naive CD8 T-cell nTPM: 24.4
Samples: 6
Max nTPM: 32.6
Min nTPM: 19.4
P10809_1016
22.7
P10809_1031
27.6
P10809_1050
24.3
P10809_1069
32.6
P10809_1087
19.4
P10809_1110
20.0
T-reg nTPM: 26.6
Samples: 6
Max nTPM: 38.6
Min nTPM: 18.1
P10809_1018
18.1
P10809_1037
24.7
P10809_1056
27.5
P10809_1075
38.6
P10809_1094
25.5
P10809_1106
25.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.3
Samples: 4
Max nTPM: 12.6
Min nTPM: 7.6
RHH5202_R3573
7.6
RHH5230_R3602
9.3
RHH5259_R3631
7.8
RHH5288_R3660
12.6
Effector memory CD8 T-cell nTPM: 14.6
Samples: 4
Max nTPM: 20.3
Min nTPM: 6.4
RHH5203_R3574
14.9
RHH5231_R3603
20.3
RHH5260_R3632
16.7
RHH5289_R3661
6.4
MAIT T-cell nTPM: 8.9
Samples: 4
Max nTPM: 13.9
Min nTPM: 6.3
RHH5233_R3605
6.3
RHH5205_R3576
8.0
RHH5262_R3634
7.4
RHH5297_R3663
13.9
Memory CD4 T-cell TFH nTPM: 13.9
Samples: 4
Max nTPM: 16.6
Min nTPM: 9.9
RHH5300_R3666
16.6
RHH5236_R3608
16.5
RHH5265_R3637
12.6
RHH5208_R3579
9.9
Memory CD4 T-cell Th1 nTPM: 14.1
Samples: 4
Max nTPM: 15.0
Min nTPM: 12.9
RHH5210_R3581
15.0
RHH5302_R3668
12.9
RHH5238_R3610
13.4
RHH5267_R3639
15.0
Memory CD4 T-cell Th1/Th17 nTPM: 10.3
Samples: 4
Max nTPM: 11.9
Min nTPM: 8.0
RHH5303_R3669
10.8
RHH5211_R3582
11.9
RHH5239_R3611
8.0
RHH5268_R3640
10.3
Memory CD4 T-cell Th17 nTPM: 16.1
Samples: 4
Max nTPM: 26.3
Min nTPM: 6.6
RHH5304_R3670
12.0
RHH5212_R3583
26.3
RHH5240_R3612
19.6
RHH5269_R3641
6.6
Memory CD4 T-cell Th2 nTPM: 16.9
Samples: 4
Max nTPM: 20.9
Min nTPM: 14.3
RHH5305_R3671
16.8
RHH5213_R3584
20.9
RHH5241_R3613
14.3
RHH5270_R3642
15.5
Naive CD4 T-cell nTPM: 13.8
Samples: 4
Max nTPM: 21.3
Min nTPM: 9.1
RHH5306_R3672
14.7
RHH5214_R3585
21.3
RHH5242_R3614
9.9
RHH5271_R3643
9.1
Naive CD8 T-cell nTPM: 14.4
Samples: 4
Max nTPM: 17.3
Min nTPM: 11.3
RHH5201_R3572
17.3
RHH5229_R3601
11.3
RHH5258_R3630
16.7
RHH5287_R3659
12.2
Non-Vd2 gdTCR nTPM: 14.3
Samples: 4
Max nTPM: 21.9
Min nTPM: 10.7
RHH5235_R3607
13.3
RHH5264_R3636
21.9
RHH5207_R3578
10.7
RHH5299_R3665
11.1
T-reg nTPM: 13.2
Samples: 4
Max nTPM: 16.2
Min nTPM: 9.8
RHH5301_R3667
12.0
RHH5237_R3609
16.2
RHH5266_R3638
9.8
RHH5209_R3580
14.6
Terminal effector memory CD4 T-cell nTPM: 6.1
Samples: 2
Max nTPM: 8.8
Min nTPM: 3.4
RHH5243_R3615
3.4
RHH5272_R3644
8.8
Terminal effector memory CD8 T-cell nTPM: 12.7
Samples: 4
Max nTPM: 17.8
Min nTPM: 8.3
RHH5232_R3604
11.7
RHH5204_R3575
17.8
RHH5261_R3633
12.9
RHH5296_R3662
8.3
Vd2 gdTCR nTPM: 13.6
Samples: 4
Max nTPM: 16.8
Min nTPM: 7.9
RHH5234_R3606
7.9
RHH5206_R3577
16.8
RHH5263_R3635
13.4
RHH5298_R3664
16.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
