HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:5.9 nTPM
HPA Brain:22.1 nTPM
GTEx:5.9 nTPM
FANTOM5:19.1 Scaled Tags Per Million
Pig:57.8 nTPM
Mouse:24.4 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB070417
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.1
Sample id Sample description nTPM
Hippocampus
nTPM: 10.3
2621 Female, age 67, right hemisphere 13.6
1911 Female, age 85, right hemisphere 11.3
1898 Male, age 80, left hemisphere 11.2
2529 Female, age 94, left hemisphere 10.9
2148 Female, age 91, left hemisphere 8.3
1855 Male, age 76, left hemisphere 6.6
Dentate gyrus
nTPM: 10.2
2530 Female, age 94, left hemisphere 12.2
2246 Female, age 85, both hemispheres 11.3
1927 Female, age 91, both hemispheres 10.0
2528 Male, age 74, both hemispheres 9.6
2531 Female, age 67, both hemispheres 9.3
2010 Male, age 76, both hemispheres 9.0
Entorhinal gyrus
nTPM: 20.1
2613 Female, age 94, left hemisphere 30.4
1938 Female, age 85, left hemisphere 25.0
2764 Male, age 80, right hemisphere 18.7
1787 Male, age 76, left hemisphere 17.8
2686 Male, age 75, right hemisphere 15.5
2117 Female, age 91, right hemisphere 13.0
Hippocampus, CA1
nTPM: 10.9
2749 Male, age 80, left hemisphere 14.6
2082 Female, age 91, right hemisphere 12.4
2527 Male, age 74, both hemispheres 11.7
1873 Female, age 85, both hemispheres 8.5
2045 Male, age 76, both hemispheres 7.4
Hippocampus, CA2
nTPM: 12.0
1940 Female, age 85, left hemisphere 13.9
2249 Male, age 74, both hemispheres 13.6
2437 Female, age 94, left hemisphere 13.5
2113 Female, age 91, right hemisphere 12.1
1892 Male, age 76, both hemispheres 9.6
1963 Male, age 80, left hemisphere 9.2
Hippocampus, CA3
nTPM: 10.3
2137 Male, age 80, left hemisphere 16.1
1867 Male, age 76, both hemispheres 10.4
2436 Male, age 74, both hemispheres 10.2
1891 Female, age 85, both hemispheres 9.4
2620 Female, age 94, left hemisphere 8.5
2861 Female, age 67, both hemispheres 7.4
Parahippocampal cortex
nTPM: 17.5
2532 Female, age 72, left hemisphere 24.7
1990 Female, age 91, right hemisphere 21.1
1850 Male, age 80, both hemispheres 19.7
2693 Female, age 94, both hemispheres 17.3
1933 Female, age 85, both hemispheres 16.8
2622 Female, age 67, right hemisphere 16.4
2018 Male, age 76, both hemispheres 15.6
2245 Female, age 91, both hemispheres 15.2
2250 Female, age 67, right hemisphere 15.0
2692 Male, age 74, both hemispheres 13.1
Perirhinal gyrus
nTPM: 22.1
1841 Female, age 85, right hemisphere 26.9
1847 Female, age 91, left hemisphere 23.1
1794 Male, age 80, right hemisphere 22.2
2848 Male, age 76, right hemisphere 20.3
2521 Female, age 94, right hemisphere 18.0
Subiculum
nTPM: 12.9
1977 Female, age 85, both hemispheres 16.0
2042 Male, age 76, both hemispheres 14.1
2438 Female, age 94, left hemisphere 13.6
1901 Male, age 80, both hemispheres 12.6
2619 Male, age 74, both hemispheres 11.7
2729 Female, age 91, right hemisphere 9.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.9
Samples: 197

Max nTPM: 29.9
Min nTPM: 1.7
Std nTPM: 2.7
Median nTPM: 5.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 14.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 13.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 13.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 12.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 11.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 10.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 10.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 10.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 10.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 9.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.1
FF:10169-103B7 60 years, female 19.7
FF:10153-102I9 76 years, female 18.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.8
Pig sample Sample description nTPM
Subiculum
nTPM: 37.2
Samples: 4

Max nTPM: 51.9
Min nTPM: 29.2
Sample A Female 51.9
Sample B Female 33.0
Sample C Male 29.2
Sample D Male 34.7
Dorsal hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 42.9
Min nTPM: 27.6
Sample A Female 42.9
Sample B Female 33.8
Sample C Male 29.6
Sample D Male 27.6
Entorhinal cortex
nTPM: 57.8
Samples: 4

Max nTPM: 69.0
Min nTPM: 47.3
Sample A Female 69.0
Sample B Female 54.2
Sample C Male 60.5
Sample D Male 47.3
Ventral hippocampus
nTPM: 35.8
Samples: 4

Max nTPM: 45.6
Min nTPM: 27.1
Sample A Female 43.0
Sample B Female 27.1
Sample C Male 45.6
Sample D Male 27.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 20.8
Min nTPM: 18.5
Sample A Male 20.8
Sample B Male 19.5
Sample C Female 18.5
Sample D Female 19.7
Hippocampal formation
nTPM: 24.4
Samples: 4

Max nTPM: 29.9
Min nTPM: 18.3
Sample A Male 18.3
Sample B Male 22.6
Sample C Female 26.8
Sample D Female 29.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69080734 Antisense, RP_050324_02_D03, Mouse strain C57BL/6J (56 days, male) 0.4

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